Job Description P0AEJ0 Confidence 0.98% Date Thu Jan 5 11:23:27 GMT 2012 Rank 67 Aligned Residues 68 % Identity 18% Template c2wwbA_ PDB info PDB header:ribosome Chain: A: PDB Molecule:protein transport protein sec61 subunit alpha isoform 1; PDBTitle: cryo-em structure of the mammalian sec61 complex bound to the2 actively translating wheat germ 80s ribosome Resolution 6.48 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	Q	K	P	L	E	G	A	Q	L	V	I	M	T	I	A	L	S	L	A	T	F	M	Q	V	L	D	S	T	I	A	N	V	A	I	P	T	I	A	G	N	L	G	S	S	L	S	Q	G	T	W	V	I	T	S	F	G	V	A	N	A	I	S	I	P	L	T	G	W	L	A	K	R	V	G
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.
Template Sequence		K	D	R	A	L	F	N	G	A	Q	K	L	F	G	M	I	I	T	I	G	Q	S	I	V	Y	V	M	T	G	M	Y	.	.	.	.	.	.	.	.	G	D	P	S	E	M	G	A	G	I	C	L	L	I	T	I	Q	L	F	V	A	G	L	I	V	L	L	L	D	E	L	L	Q	K	G	Y	G
Template Known Secondary structure		S		S	S																									T	S	S	.	.	.	.	.	.	.	.			S	S		S																												T	T	T
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.									.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions