Job Description P76241 Confidence 98.55% Date Thu Jan 5 12:21:05 GMT 2012 Rank 24 Aligned Residues 139 % Identity 13% Template d2arca_ SCOP info Double-stranded beta-helix Regulatory protein AraC Regulatory protein AraC Resolution 1.50

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.
Predicted Secondary structure																														.																																																	.
Query SS confidence																														.																																																	.
Query Sequence		L	N	G	Y	E	P	D	R	H	H	E	A	A	V	A	F	C	I	H	A	G	T	D	E	L	T	S	P	.	V	H	Q	H	R	K	G	Q	L	I	L	A	L	H	G	A	I	T	C	T	V	E	N	A	L	W	M	V	P	P	Q	Y	A	V	W	I	P	G	G	V	E	H	S	N	Q	V	T	A	.	N	A
Query Conservation																														.																																																	.
Alig confidence																														.																																																	.
Template Conservation
Template Sequence		L	P	G	Y	S	F	N	A	H	L	V	A	G	L	T	P	I	E	A	N	G	Y	L	D	F	F	I	D	R	P	L	G	M	K	G	Y	I	L	N	L	T	I	R	G	Q	G	V	V	K	N	Q	G	R	E	F	V	C	R	P	G	D	I	L	L	F	P	P	G	E	I	H	H	Y	G	R	H	P	E	A	R
Template Known Secondary structure		S	T	T				S	S	S										T	T	S	T	T		S					T	T			S	S																T	T							T	T							T	T									T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.															.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	L	C	F	L	F	I	E	P	S	A	V	T	M	P	T	T	C	C	T	L	K	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	C	R	E	L	I	L	T	L	A	N	R	T	T	T	Q	R	A	E	P	M	T	R	R	L	I	Q	V	L	F	D	E	L	P	Q	Q
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	W	Y	H	Q	W	V	Y	F	R	P	R	A	Y	W	H	E	W	L	N	W	P	S	I	F	A	N	T	G	F	F	R	P	D	E	A	H	Q	P	H	F	S	D	L	F	G	Q	I	I	N	A	G	Q	G	E	G	R	Y	S	E	L	L	A	I	N	L	L	E	Q	L	L	L	R	R	M
Template Known Secondary structure														G	G	G	G	G	G								T	T								T	T	T																			S	S	S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions