 |
Job Description | P76241 | Confidence | 92.43% | Date | Thu Jan 5 12:21:05 GMT 2012 |
Rank | 129 | Aligned Residues | 71 |
% Identity | 13% | Template | d1v7ba1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| Homeodomain-like
| Tetracyclin repressor-like, N-terminal domain
|
Resolution | 1.90 |
|
 |
  |   |
153 | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | |
220 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
Query Sequence |   |
P | V | S | S | H | P | K | I | R | T | M | V | E | M | M | A | K | G | P | V | E | W | G | A | L | G | Q | W | A | G | F | F | A | M | S | E | R | N | L | A | R | L | I | V | K | E | T | G | L | S | F | R | Q | W | R | Q | Q | L | Q | L | I | M | A | L | Q | G | L | . |
V | K | G | D | T |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |   |   |   |
|   |   |   |
|   |
|   |
|
|   |   |   |
|   |
|
|   |   |
|
|   |   |   |
|
|   |   |
|   |   |
|
| . |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|
|   |
|
|   |   |
|   |   |   |   |
|   |   |   |   |
|
|   |   |
|
|   |   |
|
|
|
|   |   |   |
|
|   |   |
|   |   |
|   |   |
| . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|
Template Sequence |   |
T | S | K | K | E | M | I | L | R | T | A | I | D | Y | I | G | E | Y | S | L | E | T | L | S | Y | D | S | L | A | E | A | T | G | L | S | K | S | G | L | I | Y | H | F | P | S | R | H | A | L | . |
L | L | G | M | H | E | L | L | A | D | D | W | D | K | E | L | R | D | I | T | R | D | P |
Template Known Secondary structure |   |
S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
| S | T | T |
|
|  |  |  |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |
| S | S |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | |
. | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|