Return to main results Retrieve Phyre Job Id

Job DescriptionP76241
Confidence49.07%DateThu Jan 5 12:21:05 GMT 2012
Rank493Aligned Residues38
% Identity16%Templated1r1ta_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain ArsR-like transcriptional regulators
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   157..160.........170.........180.........190.......
Predicted Secondary structure 











Query SS confidence 








































Query Sequence  HPKIRTMVEMMAKGPVEWGALGQWAGFFAMSERNLARLIVK
Query Conservation     
  
   
        

  

     
   
 
 

 
Alig confidence 












...
























Template Conservation     

 

  
  ...    
 


  
 

  


 

  
Template Sequence  DPNRLRLLSLLAR. . . SELCVGDLAQAIGVSESAVSHQLRS
Template Known Secondary structure 
TT...

B
T

Template Predicted Secondary structure 

...






Template SS confidence 








































   45....50....... ..60.........70.........80..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions