Return to main results Retrieve Phyre Job Id

Job DescriptionP76241
Confidence98.66%DateThu Jan 5 12:21:05 GMT 2012
Rank17Aligned Residues82
% Identity18%Templated1o4ta_
SCOP infoDouble-stranded beta-helix RmlC-like cupins TM1287-like
Resolution1.95

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30......... 40.........50.........60.........70.........80........
Predicted Secondary structure 





















.














Query SS confidence 





























.
















































Query Sequence  YEPDRHHEAAVAFCIHAGTDELTSPVHQHR. KGQLILALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCF
Query Conservation 
 

                      
 
 .  

  
  
               
    
     
            
Alig confidence 





























.
















































Template Conservation                   
 

     
 
    
   
  
            
  

   

    
   
 
      
Template Sequence  LSKEAMHNKARLFARMKLPPGSSVGLHKHEGEFEIYYILLGEGVFHDNGKDVPIKAGDVCFTDSGESHSIENTGNTDLEF
Template Known Secondary structure  S
TTTTTTS
TT


SSTTTT

TT


SSS
Template Predicted Secondary structure 





































Template SS confidence 















































































   35....40.........50.........60.........70.........80.........90.........100.........110....
 
   8990.
Predicted Secondary structure 
Query SS confidence 


Query Sequence  LFI
Query Conservation     
Alig confidence 


Template Conservation 
 
Template Sequence  LAV
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 


   115..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions