|   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | |
. | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
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. | . | . | . | 60 | . | |
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. | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
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| . |
|  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  | . | . | . | . |
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|  |  |  |  | . | . |  |
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|  |  |  |  |  |
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|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
|
Query SS confidence |   |
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| . |
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| . |
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Query Sequence |   |
V | A | F | C | I | H | A | G | T | D | E | L | T | S | P | V | H | Q | H | . |
R | K | G | Q | L | I | L | A | L | H | G | A | I | T | C | T | V | . |
. |
. |
. |
E | N | A | L | W | M | . |
. |
V | P | P | Q | Y | A | V | W | I | P | G | G | V | E | H | S | N | Q | V | T | A | N | A | E | L | C | F | L | F | I | E |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
| . |   |   |   |
|
|   |   |
|   |   |
|   |   |   |   |   |   | . | . | . | . |   |   |   |   |   |   | . | . |   |   |   |
|   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
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| . |
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| . | . | . | . |
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| . | . |
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Template Conservation |   |
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|   |   |   |   |   |
|   |
|   |   |
|   |   |
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|   |
|   |   |
|   |
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|   |
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|   |
|   |
|   |
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|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
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|   |
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|   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |
Template Sequence |   |
L | S | A | E | F | G | S | L | R | K | N | A | M | F | V | P | H | Y | N | L | N | A | N | S | I | I | Y | A | L | N | G | R | A | L | I | Q | V | V | N | C | N | G | E | R | V | F | D | G | E | L | Q | E | G | R | V | L | I | V | P | Q | N | F | V | V | A | A | R | S | Q | S | D | N | F | E | Y | V | S | F | K | T |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  | S |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |
| T | T |
|  |  |  |  |  |  |
| S | T | T |  |  |  |  |  |  |  | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
338 | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . |
  |
  |   |
93 | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . |
Predicted Secondary structure |   |
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|  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |
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Query SS confidence |   |
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Query Sequence |   |
P | S | A | V | T | M | P | T | T | C | C | T | L | K | I | S | P | L | C | R | E | L | I | L | T | L | A | N | R | T | T | T | Q | R | A | E | P | M | T | R | R | L | I | Q | V | L | F | D | E | L | P | Q | Q | P | Q | Q | Q | L | H | L | P | V | S | S | H | P | K | I | R | T | M | V | E | M | M | A | K | G | P | V |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |
Alig confidence |   |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
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|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|
|
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |
|
Template Sequence |   |
N | D | T | P | M | I | G | T | L | A | G | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
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. |
. |
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. |
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. |
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. |
. |
. |
N | S | L | L |
Template Known Secondary structure |   |
S | S | S |
|
|  |  |  | S | S | S | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T |
| T | G |
Template Predicted Secondary structure |   |
|
|
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|
|  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
Template SS confidence |   |
|
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  |   |
418 | . | 420 | . | . | . | . | . | . | . | . | . | |
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430 | . | . | . |
  |
  |   |
173 | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
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|
Query Sequence |   |
E | W | G | A | L | G | Q | W | A | G | F | F | A | M | S | E | R | N | L | A | R | L | I | V | K | E |
Query Conservation |   |
  |   |   |
|
|   |   |
|
|   |   |   |   |   |
|   |   |   |
|   |
|   |
|
|   |   |
Alig confidence |   |
|
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Template Conservation |   |
  |   |   |   |   |
|
|
|
|   |
|
|   |
|   |   |
|   |
|   |   |
|
|   |   |
|
Template Sequence |   |
N | A | L | P | E | E | V | I | Q | H | T | F | N | L | K | S | Q | Q | A | R | Q | I | K | N | N | N |
Template Known Secondary structure |   |
G | G | S |
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  | S |
|
Template Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
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  |   |
434 | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . |
  |