 |
Job Description | P76241 | Confidence | 97.25% | Date | Thu Jan 5 12:21:05 GMT 2012 |
Rank | 91 | Aligned Residues | 89 |
% Identity | 16% | Template | c2eaaB_ |
PDB info |
PDB header:plant protein | Chain: B: PDB Molecule:7s globulin-3; |
PDBTitle: crystal structure of adzuki bean 7s globulin-3
|
Resolution | 2.25 Å |
|
 |
  |   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
|
|
|
. | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  | . | . | . | . |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | A | F | C | I | H | A | G | T | D | E | L | T | S | P | V | H | Q | H | R | K | G | Q | L | I | L | A | L | H | G | A | I | T | C | T | V | . |
. |
. |
. |
E | N | A | L | W | M | V | P | P | Q | Y | A | V | W | I | P | G | G | V | E | H | S | N | Q | V | T | A | N | A | E | L | C | F | L | F | I | E | P | S | A |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|
|   |   |
|   |   |
|   |   |   |   |   |   | . | . | . | . |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |
|   |   |
|   |
|
|   |   |   |   |
|   |   |
|   |
|
|   |
|
|   |
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |   |
|
|
|   |   |
|
|
|
|   |   |
|   |   |   |
|   |
|   |   |   |   |
|   |
|   |   |
|   |   |   |
Template Sequence |   |
Y | R | V | V | E | F | K | S | K | P | N | T | L | L | L | P | H | H | A | D | A | D | F | L | L | V | V | L | N | G | R | A | I | L | T | L | V | N | P | D | S | R | D | S | Y | I | L | E | Q | G | H | A | Q | K | I | P | A | G | T | T | F | F | L | V | N | P | D | D | N | E | N | L | R | I | I | K | L | A | I | P |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |
| T | T |  |  |  |  |  |  |  |  | S |  |  |  |  |  |  |  |  |  | S |
|  |  |  |  |  |  |
| S | S |
|  |  |  |  |  |  |
| T | T |  |  |  |  |  |
| T | T |
|  |  |  |  |  |  |
|
| S | S |
|
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . |
  |
  |   |
96 | . | . | . | 100 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | T | M | P | T | T | C | C | T | L | K | I | S |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|
|   |   |   |
|   |
|
|
Template Sequence |   |
V | N | N | P | H | R | F | Q | D | F | F | L | S |
Template Known Secondary structure |   |
S | S | B | T | T | B |
|
|  |  |  |
| S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
140 | . | . | . | . | . | . | . | . | . | 150 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|