Job Description P76241 Confidence 77.91% Date Thu Jan 5 12:21:05 GMT 2012 Rank 327 Aligned Residues 144 % Identity 10% Template c2bgcA_ PDB info PDB header:transcription Chain: A: PDB Molecule:prfa; PDBTitle: prfa-g145s, a constitutive active mutant of the2 transcriptional regulator in l.monocytogenes Resolution 2.3 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.				.	.	.	.	60	.	.	.				.	.	.	.	.						.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																.	.	.									.	.	.						.	.	.	.	.
Query SS confidence																.	.	.									.	.	.						.	.	.	.	.
Query Sequence		Q	L	I	L	A	L	H	G	A	I	T	C	T	V	.	.	.	E	N	A	L	W	M	V	P	.	.	.	P	Q	Y	A	V	.	.	.	.	.	W	I	P	G	G	V	E	H	S	N	Q	V	T	A	N	A	E	L	C	F	L	F	I	E	P	S	A	V	T	M	P	T	T	C	C	T	L	K	I	S	P	L
Query Conservation																.	.	.									.	.	.						.	.	.	.	.
Alig confidence																.	.	.									.	.	.						.	.	.	.	.
Template Conservation
Template Sequence		Y	C	I	F	L	Y	D	G	I	T	K	L	T	S	I	S	E	N	G	T	I	M	N	L	Q	Y	Y	K	G	A	F	V	I	M	S	G	F	I	D	T	E	T	S	V	G	Y	Y	N	L	E	V	I	S	E	Q	A	T	A	Y	V	I	K	I	N	E	L	K	E	L	L	S	K	N	L	T	H	F	F	Y	V
Template Known Secondary structure									S									T	T	S										S	S					S	B		T	T	T			B	S									S	S
Template Predicted Secondary structure
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		C	R	E	L	I	L	T	L	A	N	R	T	T	T	Q	R	A	E	P	M	T	R	R	L	I	Q	V	L	F	D	E	L	P	Q	Q	P	Q	Q	Q	L	H	L	P	V	S	S	H	P	K	I	R	T	M	V	E	M	M	A	K	G	P	V	E	W	G	A	L	G	Q	W	A	G	F	F	A	M	S	E	R	N
Query Conservation
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	Q	T	L	Q	K	Q	V	S	Y	S	L	A	K	F	N	D	F	S	I	N	G	K	L	G	S	I	C	S	Q	L	L	I	L	T	Y	V	Y	G	K	E	T	P	D	G	I	K	I	T	.	.	.	.	.	.	.	.	.	.	.	.	L	D	N	L	T	M	Q	E	L	G	Y	S	S	G	I	A	H	S	S
Template Known Secondary structure																					T	T																						T	T						.	.	.	.	.	.	.	.	.	.	.	.		S											T	T
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.													.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
			191	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	L	A	R	L	I	V	K
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		A	V	S	R	I	I	S	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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