Job Description P76241 Confidence 56.38% Date Thu Jan 5 12:21:05 GMT 2012 Rank 446 Aligned Residues 156 % Identity 8% Template c1zybA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcription regulator, crp family; PDBTitle: crystal structure of transcription regulator from bacteroides2 thetaiotaomicron vpi-5482 at 2.15 a resolution Resolution 2.15 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		Q	H	R	K	G	Q	L	I	L	A	L	H	G	A	I	T	C	T	V	E	N	A	L	W	M	V	P	P	Q	Y	A	V	W	I	P	G	G	V	E	H	S	N	Q	V	T	A	N	A	E	L	C	F	L	F	I	E	P	S	A	V	T	M	P	T	T	C	C	T	L	K	I	S	P	L	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence																								.	.	.	.	.																																																.	.	.	.	.	.
Template Conservation																								.	.	.	.	.
Template Sequence		D	K	V	K	L	H	F	I	K	H	K	A	G	E	T	I	I	K	S	G	N	P	.	.	.	.	.	C	T	Q	L	C	F	L	L	K	G	E	I	S	I	V	T	N	A	K	E	N	I	Y	T	V	I	E	Q	I	E	A	P	Y	L	I	E	P	Q	S	L	F	G	X	N	T	N	Y	A	S	S	Y	V	A
Template Known Secondary structure			T	S									T	T						T	T	S	B	.	.	.	.	.										S									G	G	G	S									S	S					G	G	G	G	S	S	S			B		S	S
Template Predicted Secondary structure																								.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.						.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
							111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.					.	.	.	.	.	180	.
Predicted Secondary structure		.	.	.	.	.																																																																	.	.	.	.
Query SS confidence		.	.	.	.	.																																																																	.	.	.	.
Query Sequence		.	.	.	.	.	C	R	E	L	I	L	T	L	A	N	R	T	T	T	Q	R	A	E	P	M	T	R	R	L	I	Q	V	L	F	D	E	L	P	Q	Q	P	Q	Q	Q	L	H	L	P	V	S	S	H	P	K	I	R	T	M	V	E	M	M	A	K	G	P	V	E	W	.	.	.	.	G	A	L	G	Q	W	A
Query Conservation		.	.	.	.	.																																																																	.	.	.	.
Alig confidence		.	.	.	.	.																																																																	.	.	.	.
Template Conservation
Template Sequence		H	T	E	V	H	T	V	C	I	S	K	A	F	V	L	S	D	L	F	R	Y	D	I	F	R	L	N	Y	X	N	I	V	S	N	R	A	Q	N	L	Y	S	R	L	W	D	E	P	T	L	D	L	K	S	K	I	I	R	F	F	L	S	H	C	E	K	P	Q	G	E	K	T	F	K	V	K	X	D	D	L	A
Template Known Secondary structure		S	S															T	G	G	G	S																						T	T	S					S											T	T		S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	F	A	M	S	E	R	N	L	A	R	L	I	V	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	C	L	D	D	T	R	L	N	I	S	K	T	L	N	E
Template Known Secondary structure					T	S
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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