Job Description P76241 Confidence 86.00% Date Thu Jan 5 12:21:05 GMT 2012 Rank 266 Aligned Residues 82 % Identity 9% Template c1u78A_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:transposable element tc3 transposase; PDBTitle: structure of the bipartite dna-binding domain of tc32 transposase bound to transposon dna Resolution 2.69 Å

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		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.									200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.
Query Sequence		V	E	M	M	A	K	G	P	V	E	W	G	A	L	G	Q	W	A	G	F	F	A	M	S	E	R	N	L	A	R	L	I	V	K	E	T	.	.	.	.	.	.	.	.	G	L	S	F	R	Q	W	R	Q	Q	L	Q	L	I	M	A	L	Q	G	L	V	K	G	D	T	V	Q	K	V	A	H	T	L	G	Y	D
Query Conservation																																						.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.																	.
Template Conservation																																																														.
Template Sequence		R	A	Q	L	D	V	M	K	L	L	N	V	S	L	H	E	M	S	R	K	I	S	R	S	R	H	C	I	R	V	Y	L	K	D	P	V	S	Y	G	T	S	K	R	A	P	R	R	K	A	L	S	V	R	D	E	R	N	V	I	R	.	A	A	S	N	S	C	K	T	A	R	D	I	R	N	E	L	Q	L	S
Template Known Secondary structure											T	T											T												S	G	G	G	T	T										S	S											.																T	T
Template Predicted Secondary structure																																																														.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
			236	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	S	T	T	A	F	I	T	M	F	K	K
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		A	S	K	R	T	I	L	N	V	I	K	R
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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