Job Description P0A9W9 Confidence 99.67% Date Thu Jan 5 11:11:35 GMT 2012 Rank 41 Aligned Residues 135 % Identity 19% Template d3tdta_ SCOP info Single-stranded left-handed beta-helix Trimeric LpxA-like enzymes Tetrahydrodipicolinate-N-succinlytransferase, THDP-succinlytransferase, DapD Resolution 2.00

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	Y	R	D	L	F	P	Q	I	G	Q	R	V	M	I	D	D	S	S	V	V	I	G	D	V	R	L	A	D	D	V	G	I	W	P	L	V	V	I	R	G	D	V	H	Y	V	Q	I	G	A	R	T	N	I	Q	D	G	S	M	L	H	V	T	H	K	S	S	Y	N	P	D	G	N	P	L	T	I	G	E
Query Conservation
Alig confidence																															.											.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.											.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	R	F	Q	K	E	G	F	R	V	V	P	P	A	T	V	R	Q	G	A	F	I	A	R	N	T	V	L	M	.	P	S	Y	V	N	I	G	A	Y	V	.	.	.	.	.	.	.	.	.	D	E	G	T	M	V	D	T	W	A	T	V	G	.	.	.	.	.	.	.	.	.	.	.	S	C	A	Q	I	G	K
Template Known Secondary structure													T	T				B	T	T					T	T					.	S					T	T				.	.	.	.	.	.	.	.	.		T	T					T	T					.	.	.	.	.	.	.	.	.	.	.	T	T					T
Template Predicted Secondary structure																															.											.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.										.	.	.	.	.	140	.	.	.	.	.	.	.												.	.	150	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.										.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.														.	.	.	.	140	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	V	T	V	G	H	K	V	M	L	H	.	.	.	.	.	.	.	.	.	G	C	T	I	G	N	R	V	L	V	G	M	G	S	I	L	L	D	G	A	I	V	E	D	D	V	M	I	G	A	G	S	L	V	P	Q	N	K	R	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	S	G	Y	L	Y	L
Query Conservation													.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	V	H	L	S	G	G	V	G	I	G	G	V	L	E	P	L	Q	A	N	P	T	I	I	E	D	N	C	F	I	G	A	R	S	E	V	V	E	G	V	I	V	E	E	G	S	V	I	S	M	G	V	Y	L	G	Q	S	T	R	I	Y	D	R	E	T	G	E	I	H	Y	G	R	V	P	A	G	S	V	V	V
Template Known Secondary structure		T					T	T						S	B	T	T	B		S	S						T	T					T	T					T	T					T	T					T	T					T	T						T	T	T					S	S				T	T
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		144													.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	.	.	.	.	.	.	.	.	.	.	.	.	S	P	V	K	Q	I	R	P	L	S	D	E	E	K	A	G	L
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	G	N	L	P	S	K	D	G	S	Y	S	L	Y	C	A	V	I	V	K	K	V	D	A	K	T	R	G	K	V
Template Known Secondary structure								T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions