Job Description P0A9W9 Confidence 99.92% Date Thu Jan 5 11:11:35 GMT 2012 Rank 11 Aligned Residues 167 % Identity 19% Template c3pmoA_ PDB info PDB header:transferase Chain: A: PDB Molecule:udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase; PDBTitle: the structure of lpxd from pseudomonas aeruginosa at 1.3 a resolution Resolution 1.30 Å

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		5	.	.			.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.																																																																									.	.	.
Query SS confidence					.	.																																																																									.	.	.
Query Sequence		L	R	P	.	.	Y	R	D	L	F	P	Q	I	G	Q	R	V	M	I	D	D	S	S	V	V	I	G	D	V	R	L	A	D	D	V	G	I	W	P	L	V	V	I	R	G	D	V	H	Y	V	Q	I	G	A	R	T	N	I	Q	D	G	S	M	L	H	V	T	H	K	S	S	Y	N	P	D	G	N	.	.	.
Query Conservation					.	.																																																																									.	.	.
Alig confidence					.	.																																							.	.	.																																.	.	.
Template Conservation																																													.	.	.
Template Sequence		I	H	P	T	A	I	V	A	A	D	A	E	V	D	P	S	A	S	V	G	A	Y	A	V	I	E	S	G	A	R	I	G	A	G	V	S	I	G	A	H	C	V	I	.	.	.	G	A	R	S	V	I	G	E	G	G	W	L	A	P	R	V	T	L	Y	H	D	V	T	I	G	A	R	V	S	I	Q	S	G	A
Template Known Secondary structure				T	T					T	T					T	T					T	T					T	T					T	T					T	T				.	.	.		T	T					T	T					T	T					T	T					T	T					T	T
Template Predicted Secondary structure																																													.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.				.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
																									80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	T	I	G	E	D	V	T	V	G	H	K	V	M	L	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	I	G	G	E	G	F	G	F	A	N	E	K	G	V	W	Q	K	I	A	Q	I	G	G	V	T	I	G	D	D	V	E	I	G	A	N	T	T	I	D	R	G	A	L	S	D	T	L	I	G	N	G	V	K	L	D	N	Q	I	M	I	A	H	N	V	Q	I	G	D	H	T	A	M	A	A	C	V	G	I	S
Template Known Secondary structure														T	T															S	S					T	T							S	S	S						T	T					T	T					T	T					T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
			97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure		.																																										.
Query SS confidence		.																																										.
Query Sequence		.	G	C	T	I	G	N	R	V	L	V	G	M	G	S	I	L	L	D	G	A	I	V	E	D	D	V	M	I	G	A	G	S	L	V	P	Q	N	K	R	L	E	.	S	G	Y	L	Y	L	G	S	P	V	K	Q	I	R	P	L	S	D	E	E	K	A	G	L	R	Y	S	A	N	N	Y	V	K	W	K	D	E
Query Conservation		.																																										.
Alig confidence		.																																				.	.					.																	.
Template Conservation																																						.	.																						.
Template Sequence		G	S	A	K	I	G	R	H	C	M	L	A	G	G	V	G	L	V	G	H	I	E	I	C	D	N	V	F	V	T	G	M	T	M	V	T	.	.	R	S	I	T	E	P	G	S	Y	S	S	G	T	A	M	Q	P	A	A	E	W	.	K	K	S	A	A	R	I	R	Q	L	D	D	M	A	R	R	L	Q	Q	L
Template Known Secondary structure		T	T					S	S					T	T					S	S					S	S					T	T					.	.	S		B		S							S										.									T
Template Predicted Secondary structure																																						.	.																						.
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.			.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		175	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	K	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		337	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions