Job Description P0A9W9 Confidence 99.96% Date Thu Jan 5 11:11:35 GMT 2012 Rank 6 Aligned Residues 178 % Identity 16% Template c3i3aC_ PDB info PDB header:transferase Chain: C: PDB Molecule:acyl-[acyl-carrier-protein]--udp-n- PDBTitle: structural basis for the sugar nucleotide and acyl chain2 selectivity of leptospira interrogans lpxa Resolution 2.12 Å

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		5	.	.	.	.			10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.											50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure							.	.																																									.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.																																									.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	P	Y	R	.	.	D	L	F	P	Q	I	G	Q	R	V	M	I	D	D	S	S	V	V	I	G	D	V	R	L	A	D	D	V	G	I	W	P	L	V	V	I	R	G	D	V	.	.	.	.	.	.	.	.	.	.	H	Y	V	Q	I	G	A	R	T	N	I	Q	D	G	S	M	L	H	V	T	H	K	S
Query Conservation							.	.																																									.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.																																									.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	G	P	Y	S	I	I	E	G	N	V	S	I	Q	E	G	T	I	I	E	G	H	V	K	I	C	A	G	S	E	I	G	K	F	N	R	F	H	Q	G	A	V	I	G	V	M	P	Q	D	L	G	F	N	Q	Q	L	L	T	K	T	V	I	G	D	H	N	I	F	R	E	Y	S	N	I	H	K	G	T	K	E
Template Known Secondary structure				T	T					S	S					T	T					T	T					T	T					S	S					T	T								S		T	T			T	T	S								S	S					T	T							S	B	T
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		73	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.														.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure									.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	Y	N	P	D	G	N	.	P	L	T	I	G	E	D	V	T	V	G	H	K	V	M	L	H	G	.	.	.	.	.	.	.	.	.	.	.	.	.	C	T	I	G	N	R	V	L	V	G	M	G	S	I	L	L	D	G	A	I	V	E	D	D	V	M	I	G	A	G	S	L	V	P	Q	N	K	R	L	E	S
Query Conservation									.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.																			.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.
Template Conservation																																																																											.	.
Template Sequence		D	S	P	T	V	I	G	N	K	N	Y	F	M	G	N	S	H	V	G	H	D	C	I	L	G	N	N	N	I	L	T	H	G	A	V	L	A	G	H	V	T	L	G	N	F	A	F	I	S	G	L	V	A	V	H	Q	F	C	F	V	G	D	Y	S	M	V	A	G	L	A	K	V	V	.	.	Q	D	V	P	P
Template Known Secondary structure		T	B						S	S					T	T					T	T					S	S					T	T					T	T					S	S					T	T					T	T					T	T					T	T					.	.	S	B	B		T
Template Predicted Secondary structure																																																																											.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.			.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150										.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170					.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.																					.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.																					.	.	.	.
Query Sequence		G	Y	L	Y	L	G	S	P	V	K	Q	I	.	.	.	.	.	.	.	.	.	R	P	L	S	D	E	E	K	A	G	L	R	Y	S	A	N	N	Y	V	K	.	.	.	.	W	K	D	E	Y	L	D	Q	G	N	Q	T	Q	P
Query Conservation														.	.	.	.	.	.	.	.	.																					.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Conservation
Template Sequence		Y	S	T	V	D	G	N	P	S	T	V	V	G	L	N	S	V	G	M	K	R	A	G	F	S	P	E	V	R	N	A	I	K	H	A	Y	K	V	I	Y	H	S	G	I	S	T	R	K	A	L	D	E	L	E	A	S	G	N	L
Template Known Secondary structure		T						T	T													T	T	T																		S	S	S	S										T	T		S
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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