Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9W9
Confidence2.36%DateThu Jan 5 11:11:35 GMT 2012
Rank100Aligned Residues11
% Identity9%Templatec1zecA_
PDB info PDB header:viral peptideChain: A: PDB Molecule:nef1-25; PDBTitle: nmr solution structure of nef1-25, 20 structures
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   174.....180....
Predicted Secondary structure 




Query SS confidence 










Query Sequence  EYLDQGNQTQP
Query Conservation             
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Template Conservation   



 

  
Template Sequence  AVRERMRRAEP
Template Known Secondary structure 

Template Predicted Secondary structure 


Template SS confidence 










   14.....20....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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