Job Description P46888 Confidence 24.21% Date Thu Jan 5 12:04:36 GMT 2012 Rank 84 Aligned Residues 120 % Identity 13% Template d2dfaa1 SCOP info 7-stranded beta/alpha barrel Glycoside hydrolase/deacetylase LamB/YcsF-like Resolution 1.90

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		V	A	V	A	V	T	P	E	S	Q	Q	L	L	A	K	A	V	S	I	A	R	P	V	K	G	H	I	S	L	I	T	L	A	S	D	P	E	M	Y	N	Q	L	A	A	P	M	L	E	D	L	R	S	V	M	H	E	E	T	Q	S	F	L	D	K	L	I	Q	D	A	G	Y	P	V	D	K	T	F	I	A	.
Query Conservation																																																																																	.
Alig confidence																																																																																	.
Template Conservation
Template Sequence		L	A	C	G	F	H	G	G	S	P	G	R	I	L	E	A	V	R	L	A	K	A	H	G	V	A	V	G	A	H	P	G	F	P	D	L	V	G	F	G	R	R	E	M	A	L	S	P	E	E	V	Y	A	D	V	L	Y	Q	I	G	A	L	S	A	F	L	K	A	E	G	L	P	L	H	H	V	K	P	H	G
Template Known Secondary structure					S	S	S	S																T	T										S		T	T	T	T	T		S																											T	T						B
Template Predicted Secondary structure
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
										87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	Y	G	E	L	S	E	H	I	L	E	V	C	H	K	H	H	F	D	L	V	I	C	G	N	H	N	H	S	F	F	S	R	A	S	C	S	A	K	R	V	I	A	S	S	E	V	D	V	L
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.
Template Sequence		A	L	Y	L	K	A	C	R	D	R	E	T	A	R	A	I	A	L	A	V	K	A	F	D	P	G	L	P	L	V	V	L	P	.	.	.	.	.	.	.	.	G	T	V	Y	E	E	E	A	R	K	A	G	L	R	V	V
Template Known Secondary structure																										T	T							T	.	.	.	.	.	.	.	.	T	S									T	T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.									.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions