Job Description P46888 Confidence 75.10% Date Thu Jan 5 12:04:36 GMT 2012 Rank 32 Aligned Residues 115 % Identity 10% Template c3cvyA_ PDB info PDB header:lyase/dna Chain: A: PDB Molecule:re11660p; PDBTitle: drosophila melanogaster (6-4) photolyase bound to repaired2 ds dna Resolution 2.70 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		L	L	A	K	A	V	S	I	A	R	P	V	K	G	H	.	.	I	S	L	I	T	L	A	S	D	P	E	M	Y	N	Q	L	A	A	P	M	L	E	D	L	R	S	V	M	H	E	E	T	Q	S	F	L	D	K	L	I	Q	D	A	G	Y	P	V	D	K	T	F	I	A	Y	G	E	L	S	E	H	I	L	E
Query Conservation																	.	.
Alig confidence																	.	.																																							.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.
Template Sequence		A	L	S	H	I	F	T	A	A	N	A	A	P	G	R	Y	F	V	R	P	I	F	I	L	D	P	G	I	L	D	W	M	Q	V	G	A	N	R	W	R	F	L	Q	Q	T	L	E	D	L	D	N	Q	L	R	K	.	.	.	.	.	.	.	L	N	S	R	L	F	V	V	R	G	K	P	A	E	V	F	P	R
Template Known Secondary structure													S	T	T	S											T	T	T	T	T	T	S																								.	.	.	.	.	.	.	T	T								S
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.								.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		V	C	H	K	H	H	F	D	L	V	I	C	G	N	H	N	H	S	F	F	S	R	A	S	C	S	A	K	R	V	I	A	S	S	E	V	D	V	L	L	V	P	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	F	K	S	W	R	V	E	M	L	T	F	E	T	D	I	E	P	Y	S	V	T	R	D	A	A	V	Q	K	L	A	K	A	E	G	V	R	V	E	T	H	C	S	H
Template Known Secondary structure							T											S																	T	T									S
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions