Job Description P46888 Confidence 59.89% Date Thu Jan 5 12:04:36 GMT 2012 Rank 38 Aligned Residues 110 % Identity 13% Template c2xrzA_ PDB info PDB header:lyase/dna Chain: A: PDB Molecule:deoxyribodipyrimidine photolyase; PDBTitle: x-ray structure of archaeal class ii cpd photolyase from2 methanosarcina mazei in complex with intact cpd-lesion Resolution 2.20 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	L	A	K	A	V	S	I	A	R	P	V	K	G	H	I	S	L	I	T	L	A	S	D	P	E	M	Y	N	Q	L	A	A	P	M	L	E	D	L	R	S	V	M	H	E	E	T	Q	S	F	L	D	K	L	I	Q	D	A	G	Y	P	V	D	K	T	F	I	A	Y	G	E	L	S	E	H	I	L	E	V
Query Conservation
Alig confidence																											.	.	.	.	.	.	.																															.	.	.
Template Conservation																											.	.	.	.	.	.	.																															.	.	.
Template Sequence		W	A	L	L	F	S	R	A	I	A	K	E	A	N	V	P	V	V	V	V	F	C	L	T	D	.	.	.	.	.	.	.	E	F	L	E	A	G	I	R	Q	Y	E	F	M	L	K	G	L	Q	E	L	E	V	S	L	S	R	K	K	I	P	.	.	.	S	F	F	L	R	G	D	P	G	E	K	I	S	R	F
Template Known Secondary structure														T	T											G	.	.	.	.	.	.	.	G	G	G	G	S																						T	T			.	.	.						S
Template Predicted Secondary structure																											.	.	.	.	.	.	.																															.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.								60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.				90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		C	H	K	H	H	F	D	L	V	I	C	G	N	H	N	H	S	F	F	S	R	A	S	C	S	A	K	R	V	I	A	S	S	E	V	D	V	L	L	V	P	L	T
Query Conservation
Alig confidence													.	.	.
Template Conservation													.	.	.
Template Sequence		V	K	D	Y	N	A	G	T	L	V	T	.	.	.	D	F	S	P	L	R	I	K	N	Q	W	I	E	K	V	I	S	G	I	S	I	P	F	F	E	V	D	A	H
Template Known Secondary structure					T	T		S					.	.	.					S													T			S								S
Template Predicted Secondary structure													.	.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.				.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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