Job Description P46888 Confidence 44.09% Date Thu Jan 5 12:04:36 GMT 2012 Rank 57 Aligned Residues 101 % Identity 16% Template c1o94D_ PDB info PDB header:electron transport Chain: D: PDB Molecule:electron transfer flavoprotein alpha-subunit; PDBTitle: ternary complex between trimethylamine dehydrogenase and2 electron transferring flavoprotein Resolution 2.0 Å

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		5	.	.	.	.	10	.	.						.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.
Query SS confidence										.	.	.	.	.
Query Sequence		N	I	L	V	A	V	A	V	.	.	.	.	.	T	P	E	S	Q	Q	L	L	A	K	A	V	S	I	A	R	P	V	K	G	H	I	S	L	I	T	L	A	S	D	P	E	M	Y	N	Q	L	A	A	P	M	L	E	D	L	R	S	V	M	H	E	E	T	Q	S	F	L	D	K	L	I	Q	D	A	G	Y	P
Query Conservation										.	.	.	.	.
Alig confidence										.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	L	V	I	A	E	H	R	R	N	D	L	R	P	V	S	L	E	L	I	G	A	A	N	G	L	K	K	S	G	E	D	K	V	V	V	A	V	I	G	S	Q	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	V	P	A	L	S	V	N	G
Template Known Secondary structure											T	T				T											T	T		S	S	T	T									S	T	T	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G						B	T	T
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.																										.	.	.	50	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.									90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.
Query Sequence		V	D	K	T	F	I	A	Y	G	E	.	.	.	.	.	.	.	.	L	S	E	H	I	L	E	V	C	H	K	H	H	F	D	L	V	I	C	G	N	H	N	H	S	F	F	S	R	A	S	C	S	A	K	R	V	I	A	S	S	E	V	D	V	L
Query Conservation												.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.																											.	.	.	.	.
Template Conservation																																														.	.	.	.	.
Template Sequence		V	D	E	L	V	V	V	K	G	S	S	I	D	F	D	P	D	V	F	E	A	S	V	S	A	L	I	A	A	H	N	P	S	V	V	L	L	P	H	S	V	D	S	L	.	.	.	.	.	G	Y	A	S	S	L	A	S	K	T	G	Y	G	F	A
Template Known Secondary structure			S								S		S	S																				S							S					.	.	.	.	.	T	T							T	T	T
Template Predicted Secondary structure																																														.	.	.	.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100						.	.	.	.	.	.	.	.	.	110	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions