Return to main results Retrieve Phyre Job Id

Job DescriptionP46888
Confidence20.17%DateThu Jan 5 12:04:36 GMT 2012
Rank96Aligned Residues107
% Identity7%Templatec1k97A_
PDB info PDB header:ligaseChain: A: PDB Molecule:argininosuccinate synthase; PDBTitle: crystal structure of e. coli argininosuccinate synthetase in complex2 with aspartate and citrulline
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60. ........70
Predicted Secondary structure 























...........
Query SS confidence 



























































. . . . . . . . . . .








Query Sequence  SYSNILVAVAVTPESQQLLAKAVSIARPVKGHISLITLASDPEMYNQLAAPMLEDLRSVM. . . . . . . . . . . HEETQSFLD
Query Conservation    
 





 
  
  

  
  

      
  
 
                      ...........         
Alig confidence 





















....













..

















...........








Template Conservation   
 




 









  
....

 
 

 

 

 ..

   

       
  

     
 
 
 

    
 
Template Sequence  VGQRIGIAFSGGLDTSAALLWM. . . . RQKGAVPYAYTANL. . GQPDEEDYDAIPRRAMEYGAENARLIDCRKQLVAEGIA
Template Known Secondary structure  TTS


S....TT

..

TT
S
TTTT
S
Template Predicted Secondary structure 





....




..









Template SS confidence 















































































   910.........20.........30 .........40.... .....50.........60.........70.........80..
 
   71........80.........90 .........100.........110....
Predicted Secondary structure 






.......









Query SS confidence 



















. . . . . . .























Query Sequence  KLIQDAGYPVDKTFIAYGEL. . . . . . . SEHILEVCHKHHFDLVICGNHNHS
Query Conservation                   
  .......   
         



 
     
Alig confidence 



















.......























Template Conservation 

 
 
  
      
 
 
 


 
    


 
   

  



 



Template Sequence  AIQCGAFHNTTGGLTYFNTTPLGRAVTGTMLVAAMKEDGVNIWGDGSTYKG
Template Known Secondary structure  T



TT


TT





TTS
Template Predicted Secondary structure 























Template SS confidence 


















































   83......90.........100.........110.........120.........130...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions