Job Description P0A6F5 Confidence 100.00% Date Wed Jan 25 15:20:15 GMT 2012 Rank 27 Aligned Residues 448 % Identity 60% Template c3rtkA_ PDB info PDB header:chaperone Chain: A: PDB Molecule:60 kda chaperonin 2; PDBTitle: crystal structure of cpn60.2 from mycobacterium tuberculosis at 2.8a Resolution 2.80 Å

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	D	K	F	E	N	M	G	A	Q	M	V	K	E	V	A	S	K	A	N	D	A	A	G	D	G	T	T	T	A	T	V	L	A	Q	A	I	I	T	E	G	L	K	A	V	A	A	G	M	N	P	M	D	L	K	R	G	I	D	K	A	V	T	A	A	V	E	E	L	K	A	L	S	V	P	C	S	D	S
Query Conservation
Alig confidence																			.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.
Template Sequence		L	E	D	P	Y	E	K	I	G	A	E	L	V	K	E	V	A	.	.	.	.	.	.	.	K	K	T	D	T	T	A	T	V	L	A	Q	A	L	V	R	E	G	L	R	N	V	A	A	G	A	N	P	L	G	L	K	R	G	I	E	K	A	V	E	K	V	T	E	T	L	L	K	G	A	K	E	V	E	T	K
Template Known Secondary structure																			.	.	.	.	.	.	.	T	S																					T	T	T																								T		B				S
Template Predicted Secondary structure																			.	.	.	.	.	.	.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.								.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	I	A	Q	V	G	T	I	S	A	N	S	D	E	T	V	G	K	L	I	A	E	A	M	D	K	V	G	K	E	G	V	I	T	V	E	D	G	T	G	L	Q	D	E	L	D	V	V	E	G	M	Q	F	D	R	G	Y	L	S	P	Y	F	I	N	K	P	E	T	G	A	V	E	L	E	S	P	F	I	L
Query Conservation
Alig confidence														.
Template Conservation														.
Template Sequence		E	Q	I	A	A	T	A	A	I	S	A	G	.	D	Q	S	I	G	D	L	I	A	E	A	M	D	K	V	G	N	E	G	V	I	T	V	E	E	S	N	T	F	G	L	Q	L	E	L	T	E	G	M	R	F	D	K	G	Y	I	S	G	Y	F	V	T	D	P	E	R	Q	E	A	V	L	E	D	P	Y	I	L
Template Known Secondary structure													T	.															S		T	T	S								S	S	S	S												S			B	S	S	G	G	G		S	B	T	T	T	T	B					S
Template Predicted Secondary structure														.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	D	K	K	I	S	N	I	R	E	M	L	P	V	L	E	A	V	A	K	A	G	K	P	L	L	I	I	A	E	D	V	E	G	E	A	L	A	T	L	V	V	N	T	M	R	G	I	V	K	V	A	A	V	K	A	P	G	F	G	D	R	R	K	A	M	L	Q	D	I	A	T	L	T	G	G	T	V	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	S	S	K	V	S	T	V	K	D	L	L	P	L	L	E	K	V	I	G	A	G	K	P	L	L	I	I	A	E	D	V	E	G	E	A	L	S	T	L	V	V	N	K	I	R	G	T	F	K	S	V	A	V	K	A	P	G	F	G	D	R	R	K	A	M	L	Q	D	M	A	I	L	T	G	G	Q	V	I
Template Known Secondary structure			B	S	S					S	T	T	T									T	T	T								S																	S	S									S	S																	T				B
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	E	I	G	M	E	L	E	K	A	T	L	E	D	L	G	Q	A	K	R	V	V	I	N	K	D	T	T	T	I	I	D	G	V	G	E	E	A	A	I	Q	G	R	V	A	Q	I	R	Q	Q	I	E	E	A	T	S	D	Y	D	R	E	K	L	Q	E	R	V	A	K	L	A	G	G	V	A	V	I	K	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	E	E	V	G	L	T	L	E	N	A	D	L	S	L	L	G	K	A	R	K	V	V	V	T	K	D	E	T	T	I	V	E	G	A	G	D	T	D	A	I	A	G	R	V	A	Q	I	R	Q	E	I	E	N	S	D	S	D	Y	D	R	E	K	L	Q	E	R	L	A	K	L	A	G	G	V	A	V	I	K	A
Template Known Secondary structure			S	S	S	S			S	T	T			T	T	T	S										S	S									S																		T		S
Template Predicted Secondary structure
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	A	T	E	V	E	M	K	E	K	K	A	R	V	E	D	A	L	H	A	T	R	A	A	V	E	E	G	V	V	A	G	G	G	V	A	L	I	R	V	A	S	K	L	A	D	L	R	G	Q	N	E	D	Q	N	V	G	I	K	V	A	L	R	A	M	E	A	P	L	R	Q	I	V	L	N	C	G	E	E
Query Conservation
Alig confidence																																																			.
Template Conservation																																																			.
Template Sequence		G	A	A	T	E	V	E	L	K	E	R	K	H	R	I	E	D	A	V	R	N	A	K	A	A	V	E	E	G	I	V	A	G	G	G	V	T	L	L	Q	A	A	P	T	L	D	E	L	K	.	L	E	G	D	E	A	T	G	A	N	I	V	K	V	A	L	E	A	P	L	K	Q	I	A	F	N	S	G	L	E
Template Known Secondary structure					S	S	T																											T	T	T					T	T	G	G	G	S	T	T	S		.			T	T												T	T								T	T	T	T
Template Predicted Secondary structure																																																			.
Template SS confidence
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.		.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	V	V	A	N	T	V	K	G	G	D	G	N	Y	G	Y	N	A	A	T	E	E	Y	G	N	M	I	D	M	G	I	L	D	P	T	K	V	T	R	S	A	L	Q	Y	A	A	S	V	A	G	L	M	I	T	T	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	G	V	V	A	E	K	V	R	N	L	P	A	G	H	G	L	N	A	Q	T	G	V	Y	E	D	L	L	A	A	G	V	A	D	P	V	K	V	T	R	S	A	L	Q	N	A	A	S	I	A	G	L	F	L	T	T	E
Template Known Secondary structure												S		T	T					S	S	S						T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		459	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.