Job Description P0A6F5 Confidence 100.00% Date Wed Jan 25 15:20:15 GMT 2012 Rank 16 Aligned Residues 469 % Identity 19% Template c3p9en_ PDB info PDB header:chaperone Chain: N: PDB Molecule: PDBTitle: the crystal structure of yeast cct reveals intrinsic asymmetry of2 eukaryotic cytosolic chaperonins Resolution 3.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	A	K	D	V	K	F	G	N	D	A	R	V	K	M	L	R	G	V	N	V	L	A	D	A	V	K	V	T	L	G	P	K	G	R	N	V	V	L	D	K	S	F	G	A	P	T	I	T	K	D	G	V	S	V	A	R	E	I	E	L	E	D	K	F	E	N	M	G	A	Q	M	V	K	E	V	A	S	K
Query Conservation
Alig confidence																																																																	.	.	.	.
Template Conservation																																																																	.	.	.	.
Template Sequence		N	P	K	A	E	S	L	R	R	D	A	A	L	K	V	N	V	T	S	A	E	G	L	Q	S	V	L	E	T	N	L	G	P	K	G	T	L	K	M	L	V	D	G	A	G	N	I	K	L	T	K	D	G	K	V	L	L	T	E	M	Q	I	Q	.	.	.	.	S	P	T	A	V	L	I	A	R	A	A	A	A
Template Known Secondary structure			T	T																		T							T	T	T	S	S	T	T									T	T	S														T	S				.	.	.	.
Template Predicted Secondary structure																																																																	.	.	.	.
Template SS confidence
		1007	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.					1070	.	.	.	.	.	.	.	.	.	1080	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.					.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.																			.
Query SS confidence																																																											.	.	.	.																			.
Query Sequence		A	N	D	A	A	G	D	G	T	T	T	A	T	V	L	A	Q	A	I	I	T	E	G	L	K	A	V	A	A	G	M	N	P	M	D	L	K	R	G	I	D	K	A	V	T	A	A	V	E	E	L	K	A	L	S	V	P	.	.	.	.	C	S	D	S	K	A	I	A	Q	V	G	T	I	S	A	N	S	D	.
Query Conservation																																																											.	.	.	.																			.
Alig confidence																																																											.	.	.	.																			.
Template Conservation
Template Sequence		Q	D	E	I	T	G	D	G	T	T	T	V	V	C	L	V	G	E	L	L	R	Q	A	H	R	F	I	Q	E	G	V	H	P	R	I	I	T	D	G	F	E	I	A	R	K	E	S	M	K	F	L	D	E	F	K	I	S	K	T	N	L	S	N	D	R	E	F	L	L	Q	V	A	R	S	S	L	L	T	K	V
Template Known Secondary structure							S	S																				T	T	T	T																													S	S	S	S	T	T												T		S	T	T
Template Predicted Secondary structure
Template SS confidence
		1083	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.
							156	.	.	.	160	.	.	.	.	.	.	.	.	.									170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure		.	.	.	.	.															.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.															.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	E	T	V	G	K	L	I	A	E	A	M	D	K	V	.	.	.	.	.	.	.	.	G	K	E	G	V	I	T	V	E	D	G	T	G	L	Q	D	E	L	D	V	V	E	G	M	Q	F	D	R	G	Y	L	S	P	Y	F	I	N	K	P	E	T	G	A	V	E	L	E	S	P	F	I	L	L
Query Conservation		.	.	.	.	.															.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.															.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	D	L	T	E	V	L	T	P	I	V	T	D	A	V	L	S	V	Y	D	A	Q	A	D	N	L	D	L	H	M	V	E	I	M	Q	M	Q	H	L	S	P	K	D	T	T	F	I	K	G	L	V	L	D	H	G	G	R	H	P	D	M	P	T	R	V	K	N	A	Y	V	L	I	L	N	V	S	L	E	Y
Template Known Secondary structure							S	S												T						T	T			G	G	G									S		T	T	T					S	S				S					S	S	S	S		S	S	B		S										S	S	S
Template Predicted Secondary structure
Template SS confidence
		1163	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.
		223	.	.	.	.	.	.																		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	D	K	K	I	S	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	R	E	M	L	P	V	L	E	A	V	A	K	A	G	K	P	L	L	I	I	A	E	D	V	E	G	E	A	L	A	T	L	V	V	N	T	M	R	G	I	V	K	V	A	A	V	K	A	P	G	F	G	D	R	R
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.																												.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.																												.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	K	T	E	V	N	S	G	F	F	Y	S	S	A	D	Q	R	D	K	L	A	A	S	E	R	K	F	V	D	A	K	L	K	K	I	I	D	L	K	F	.	V	I	I	N	Q	K	G	I	D	P	M	S	L	D	V	F	A	K	H	N	I	L	A	L	R	R	A	.	.	.	.	.	.	.	.	.	.	.	K
Template Known Secondary structure					S	S								S	S	S																										.					S	S											T	T	T	T								.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																										.																												.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1243	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.		.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.												1310
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.				.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure																																								.	.	.
Query SS confidence																																								.	.	.
Query Sequence		K	A	M	L	Q	D	I	A	T	L	T	G	G	T	V	I	S	E	E	I	G	M	E	L	E	K	A	T	L	E	D	L	G	Q	A	K	R	V	.	.	.	V	I	N	K	D	T	T	T	I	I	D	G	V	G	E	E	A	A	I	Q	G	R	V	A	Q	I	R	Q	Q	I	E	E	A	T	S	D	Y	D	R
Query Conservation																																								.	.	.
Alig confidence																			.	.	.	.	.																	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	R	N	M	E	R	L	Q	L	V	T	G	G	E	A	Q	N	.	.	.	.	.	S	V	E	D	L	S	P	Q	I	L	G	F	S	G	L	V	Y	Q	E	T	I	G	E	E	K	F	T	Y	V	T	E	N	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											T	T	T	B					.	.	.	.	.			S	S		S	T	T			B					B		B				S	S							S	S		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1322	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.						.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410		.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430					.	.	.	.	.	.	.
Predicted Secondary structure																																																		.																					.	.	.	.
Query SS confidence																																																		.																					.	.	.	.
Query Sequence		E	K	L	Q	E	R	V	A	K	L	A	G	G	V	A	V	I	K	V	G	A	A	T	E	V	E	M	K	E	K	K	A	R	V	E	D	A	L	H	A	T	R	A	A	V	E	E	G	.	V	V	A	G	G	G	V	A	L	I	R	V	A	S	K	L	A	D	L	R	.	.	.	.	G	Q	N	E	D	Q	N
Query Conservation																																																		.																					.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																																							.																					.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	D	P	K	S	C	T	I	L	I	K	G	S	T	H	Y	A	L	A	Q	T	K	D	A	V	R	D	G	L	R	A	V	A	N	V	L	K	D	K	N	I	I	P	G	A	G	A	F	Y	I	A	L	S	R	Y	L	R	S	A	N	M	N	K	L	G	A	K	G	K	T	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.			S									S																							T	T	S						T	T	T															T	T	T	T	T	T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Template SS confidence
												1372	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.
		438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.										.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.
Query Sequence		V	G	I	K	V	A	L	R	A	M	E	A	P	L	R	Q	I	V	L	N	C	G	E	E	P	S	V	V	A	N	T	V	K	G	.	.	.	.	.	.	.	.	.	G	D	G	N	Y	G	Y	N	A	A	T	E	E	Y	G	N	M	I	D	M	G	I	L	D	P	T	K	V	T	R	S	A	L	Q	Y	A	A
Query Conservation																																				.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	G	I	E	A	F	A	E	A	L	L	V	I	P	K	T	L	V	K	N	S	G	F	D	P	L	D	V	L	A	M	V	E	D	E	L	D	D	A	Q	D	S	D	E	T	R	Y	V	G	V	D	L	N	I	G	D	S	C	D	P	T	I	E	G	I	W	D	S	Y	R	V	L	R	N	A	I	T	G	A	T
Template Known Secondary structure																				T	T	T			T	T	T	T													T	T	S	T	T	S	S					B	T	T	T	T	B				S	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		1442	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.
		509	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	A	G	L	M	I	T	T	E	C	M	V	T	D	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	A	S	N	L	L	L	C	D	E	L	L	R	A	G	R
Template Known Secondary structure									T		S
Template Predicted Secondary structure
Template SS confidence
		1522	.	.	.	.	.	.	.	1530	.	.	.	.	.	.	.	.