Job Description P0A6F5 Confidence 100.00% Date Wed Jan 25 15:20:15 GMT 2012 Rank 12 Aligned Residues 474 % Identity 22% Template c3p9ee_ PDB info PDB header:chaperone Chain: E: PDB Molecule: PDBTitle: the crystal structure of yeast cct reveals intrinsic asymmetry of2 eukaryotic cytosolic chaperonins Resolution 3.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	K	D	V	K	F	G	N	D	A	R	V	K	M	L	R	G	V	N	V	L	A	D	A	V	K	V	T	L	G	P	K	G	R	N	V	V	L	D	K	S	F	G	A	P	T	I	T	K	D	G	V	S	V	A	R	E	I	E	L	E	D	K	F	E	N	M	G	A	Q	M	V	K	E	V	A	S	K	A
Query Conservation
Alig confidence																																																																.	.	.	.
Template Conservation																																																																.	.	.	.
Template Sequence		G	N	K	K	R	Q	H	G	L	E	A	K	K	S	H	I	L	A	A	R	S	V	A	S	I	I	K	T	S	L	G	P	R	G	L	D	K	I	L	I	S	P	D	G	E	I	T	I	T	N	D	G	A	T	I	L	S	Q	M	E	L	D	.	.	.	.	N	E	I	A	K	L	L	V	Q	L	S	K	S	Q
Template Known Secondary structure					S		S																				T	G	G	G	S	S	T	T									S	S	S						S									S				.	.	.	.	S
Template Predicted Secondary structure																																																																.	.	.	.
Template SS confidence
		1036	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.					.	.	1100	.	.	.	.	.	.	.	.	.	1110	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140							.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.
Query Sequence		N	D	A	A	G	D	G	T	T	T	A	T	V	L	A	Q	A	I	I	T	E	G	L	K	A	V	A	A	G	M	N	P	M	D	L	K	R	G	I	D	K	A	V	T	A	A	V	E	E	L	K	A	L	S	V	P	C	S	D	.	.	.	.	.	.	S	K	A	I	A	Q	V	G	T	I	S	A	N	S	D
Query Conservation																																																													.	.	.	.	.	.
Alig confidence																																																													.	.	.	.	.	.
Template Conservation
Template Sequence		D	D	E	I	G	D	G	T	T	G	V	V	V	L	A	S	A	L	L	D	Q	A	L	E	L	I	Q	K	G	I	H	P	I	K	I	A	N	G	F	D	E	A	A	K	L	A	I	S	K	L	E	E	T	C	D	D	I	S	A	S	N	D	E	L	F	R	D	F	L	L	R	A	A	K	T	S	L	G	S	K
Template Known Secondary structure					T	S	S		T	T																		T	T	T																					T	T	T	T	T	S	S	S	S	B				S	S														S	S	S
Template Predicted Secondary structure
Template SS confidence
		1112	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.
								156	.	.	.	160	.	.	.	.	.	.	.	.	.									170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure		.	.	.	.	.	.															.	.	.	.	.	.	.	.																																							.
Query SS confidence		.	.	.	.	.	.															.	.	.	.	.	.	.	.																																							.
Query Sequence		.	.	.	.	.	.	E	T	V	G	K	L	I	A	E	A	M	D	K	V	.	.	.	.	.	.	.	.	G	K	E	G	V	I	T	V	E	D	G	T	G	L	Q	D	E	L	D	V	V	E	G	M	Q	F	D	R	G	Y	L	S	P	Y	F	I	N	K	.	P	E	T	G	A	V	E	L	E	S	P	F	I
Query Conservation		.	.	.	.	.	.															.	.	.	.	.	.	.	.																																							.
Alig confidence		.	.	.	.	.	.															.	.	.	.	.	.	.	.																																							.
Template Conservation
Template Sequence		I	V	S	K	D	H	D	R	F	A	E	M	A	V	E	A	V	I	N	V	M	D	K	D	R	K	D	V	D	F	D	L	I	K	M	Q	G	R	V	G	G	S	I	S	D	S	K	L	I	N	G	V	I	L	D	K	D	F	S	H	P	Q	M	P	K	E	G	S	D	G	V	K	L	A	I	L	T	C	P	F
Template Known Secondary structure		T	T	T	T	T														T	S	S	T	T	T		S													S	S	S		G	G	G					S	S				S	S				T	T	S				T	T		S	S								S
Template Predicted Secondary structure
Template SS confidence
		1192	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.
		221	.	.	.	.	.	.	.	.	230																		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	A	D	K	K	I	S	N	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	M	L	P	V	L	E	A	V	A	K	A	G	K	P	L	L	I	I	A	E	D	V	E	G	E	A	L	A	T	L	V	V	N	T	M	R	G	I	V	K	V	A	A	V	K	A	P	G	F	G	D
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		E	P	P	K	P	K	T	K	H	K	L	D	I	S	S	V	E	E	Y	Q	K	L	Q	T	Y	E	Q	D	K	F	K	E	M	I	D	D	V	K	K	A	G	A	D	V	V	I	C	Q	W	G	F	D	D	E	A	N	H	L	L	L	Q	N	D	L	P	A	V	R	W	V	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S				S	S								S	S	S																								T		S						S	S			S								T	T	T								.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1277	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	K	A	M	L	Q	D	I	A	T	L	T	G	G	T	V	I	S	E	E	I	G	M	E	L	E	K	A	T	L	E	D	L	G	Q	A	K	R	V	V	I	N	K	D	T	T	T	I	I	D	G	V	G	E	E	A	A	I	Q	G	R	V	A	Q	I	R	Q	Q	I	E	E	A	T	S	D	Y	D	R	E
Query Conservation
Alig confidence		.																			.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																			.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	G	G	Q	E	L	E	H	I	A	I	S	T	N	G	R	I	V	P	.	.	.	.	.	R	F	Q	D	L	S	K	D	K	L	G	T	C	S	R	I	Y	E	Q	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	G	T	T	K	D
Template Known Secondary structure		.		T	T	T															.	.	.	.	.	S	S	S				T	T	S					S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	S	S
Template Predicted Secondary structure		.																			.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			1347	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.						.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.																															.	.	.	.	.	1390
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410		.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.		.	.	.	.	.	.	.	440	.
Predicted Secondary structure																																																	.																							.
Query SS confidence																																																	.																							.
Query Sequence		K	L	Q	E	R	V	A	K	L	A	G	G	V	A	V	I	K	V	G	A	A	T	E	V	E	M	K	E	K	K	A	R	V	E	D	A	L	H	A	T	R	A	A	V	E	E	G	.	V	V	A	G	G	G	V	A	L	I	R	V	A	S	K	L	A	D	L	R	G	Q	.	N	E	D	Q	N	V	G	I	K
Query Conservation																																																	.																							.
Alig confidence																																																	.																							.
Template Conservation
Template Sequence		R	M	L	I	I	E	Q	S	K	E	T	K	T	V	T	C	F	V	R	G	S	N	K	M	I	V	D	E	A	E	R	A	L	H	D	S	L	C	V	V	R	N	L	V	K	D	S	R	V	V	Y	G	G	G	A	A	E	V	T	M	S	L	A	V	S	E	E	A	D	K	Q	R	G	I	D	Q	Y	A	F	R
Template Known Secondary structure										S			S									T	T	T	T	T					T																S						T	T	T																T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		1391	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470
		442	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470						.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.
Query SS confidence																															.	.	.	.	.
Query Sequence		V	A	L	R	A	M	E	A	P	L	R	Q	I	V	L	N	C	G	E	E	P	S	V	V	A	N	T	V	K	.	.	.	.	.	G	G	D	G	N	Y	G	Y	N	A	A	T	E	E	Y	G	N	M	I	D	M	G	I	L	D	P	T	K	V	T	R	S	A	L	Q	Y	A	A	S	V	A	G	L	M	I	T
Query Conservation																															.	.	.	.	.
Alig confidence																															.	.	.	.	.
Template Conservation
Template Sequence		G	F	A	Q	A	L	D	T	I	P	M	T	L	A	E	N	S	G	L	D	P	I	G	T	L	S	T	L	K	S	K	Q	L	K	E	K	I	S	N	I	G	V	D	C	L	G	Y	G	S	N	D	M	K	E	L	F	V	V	D	P	F	I	G	K	K	Q	Q	I	L	L	A	T	Q	L	C	R	M	I	L	K
Template Known Secondary structure								T									T	T	T	S																T	T	T	S	S	B			B	T	T	T	T	B			B	T	T	T	T	T																								T
Template Predicted Secondary structure
Template SS confidence
		1471	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.	.	.	.	.	.	.	1540	.	.	.	.	.	.	.	.	.	1550
		517	.	.	520	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	C	M	V	T	D	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	D	N	V	I	I	S	G	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1551	.	.	.	.	.	.	.	.