Job Description P0A6F5 Confidence 100.00% Date Wed Jan 25 15:20:15 GMT 2012 Rank 26 Aligned Residues 471 % Identity 22% Template c3p9ec_ PDB info PDB header:chaperone Chain: C: PDB Molecule: PDBTitle: the crystal structure of yeast cct reveals intrinsic asymmetry of2 eukaryotic cytosolic chaperonins Resolution 3.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	K	D	V	K	F	G	N	D	A	R	V	K	M	L	R	G	V	N	V	L	A	D	A	V	K	V	T	L	G	P	K	G	R	N	V	V	L	D	K	S	F	G	A	P	T	I	T	K	D	G	V	S	V	A	R	E	I	E	L	E	D	K	F	E	N	M	G	A	Q	M	V	K	E	V	A	S	K	A
Query Conservation
Alig confidence																																																																.	.	.	.
Template Conservation																																																																.	.	.	.
Template Sequence		A	S	Q	E	R	T	T	G	R	Q	A	Q	I	S	N	I	T	A	A	K	A	V	A	D	V	I	R	T	C	L	G	P	K	A	M	L	K	M	L	L	D	P	M	G	G	L	V	L	T	N	D	G	H	A	I	L	R	E	I	D	V	A	.	.	.	.	H	P	A	A	K	S	M	L	E	L	S	R	T	Q
Template Known Secondary structure		T	T			B		T	T						T	T											S	T	T	T		S	S	S						B			T	T	T			B												S				.	.	.	.						T					T	T	T
Template Predicted Secondary structure																																																																.	.	.	.
Template SS confidence
		1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.					.	.	.	.	.	.	.	.	1080	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																										.																																			.	.																	.	.	.
Query SS confidence																										.																																			.	.																	.	.	.
Query Sequence		N	D	A	A	G	D	G	T	T	T	A	T	V	L	A	Q	A	I	I	T	E	G	L	K	.	A	V	A	A	G	M	N	P	M	D	L	K	R	G	I	D	K	A	V	T	A	A	V	E	E	L	K	A	L	S	V	P	C	S	.	.	D	S	K	A	I	A	Q	V	G	T	I	S	A	N	S	D	.	.	.
Query Conservation																										.																																			.	.																	.	.	.
Alig confidence																										.																																			.	.																	.	.	.
Template Conservation
Template Sequence		D	E	E	V	G	D	G	T	T	T	V	I	I	L	A	G	E	I	L	A	Q	C	A	P	Y	L	I	E	K	N	I	H	P	V	I	I	I	Q	A	L	K	K	A	L	T	D	A	L	E	V	I	K	Q	V	S	K	P	V	D	V	E	N	D	A	A	M	K	K	L	I	Q	A	S	I	G	T	K	Y	V	I
Template Known Secondary structure						S	S																						S																													T	T	T	T			T								T	T	T	S	T	T	S	T	T	G
Template Predicted Secondary structure
Template SS confidence
		1086	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.
					156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.							.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																			.	.	.	.	.	.
Query SS confidence		.	.	.																			.	.	.	.	.	.
Query Sequence		.	.	.	E	T	V	G	K	L	I	A	E	A	M	D	K	V	G	K	E	G	.	.	.	.	.	.	V	I	T	V	E	D	G	T	G	L	Q	D	E	L	D	V	V	E	G	M	Q	F	D	R	G	Y	L	S	P	Y	F	I	N	K	P	E	T	G	A	V	E	L	E	S	P	F	I	L	L	A	D	K	K
Query Conservation		.	.	.																			.	.	.	.	.	.
Alig confidence		.	.	.																			.	.	.	.	.	.
Template Conservation
Template Sequence		H	W	S	E	K	M	C	E	L	A	L	D	A	V	K	T	V	R	K	D	L	I	D	I	K	R	Y	V	R	V	E	K	I	P	G	G	D	V	L	D	S	R	V	L	K	G	V	L	L	N	K	D	V	V	H	P	K	M	S	R	H	I	E	N	P	R	V	V	L	L	D	C	P	L	E	Y	K	K	G	E
Template Known Secondary structure		G	G													T	T	S	T	T						S	S	S	S						S	S			G	G	G		B			S	S								S		T	T	S		S				S											S					T
Template Predicted Secondary structure
Template SS confidence
		1166	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.
		227																		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	N	I	R	E	M	L	P	V	L	E	A	V	A	K	A	G	K	P	L	L	I	I	A	E	D	V	E	G	E	A	L	A	T	L	V	V	N	T	M	R	G	I	V	K	V	A	A	V	K	A	P	G	F	G	D	R	R	K	A	M	L
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	Q	T	N	I	E	I	E	K	E	E	D	W	N	R	I	L	Q	I	E	E	E	Q	V	Q	L	M	C	E	Q	I	L	A	V	R	P	T	L	V	I	T	E	K	G	V	S	D	L	A	Q	H	Y	L	L	K	G	G	C	S	V	L	R	R	V	.	.	.	.	.	.	.	.	.	.	.	K	K	S	D	N
Template Known Secondary structure		T	T							S	T	T																						T	T			S					S	S				T									T	T								.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1257	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320												.	.	.	.	.
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		Q	D	I	A	T	L	T	G	G	T	V	I	S	E	E	I	G	M	E	L	E	K	A	T	L	E	D	L	G	Q	.	A	K	R	V	V	I	N	K	D	T	T	T	I	I	D	G	V	G	E	E	A	A	I	Q	G	R	V	A	Q	I	R	Q	Q	I	E	E	A	T	S	D	Y	D	R	E	K	L	Q	E	R
Query Conservation																																.
Alig confidence															.	.	.	.	.													.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	R	I	A	R	V	T	G	A	T	I	V	N	.	.	.	.	.	R	V	E	D	L	K	E	S	D	V	G	T	N	C	G	L	F	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	M	I	G	D	E	Y	F	S	F
Template Known Secondary structure									T					S	.	.	.	.	.		S	T	T			T	T	S		B				S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T
Template Predicted Secondary structure															.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1326	.	.	.	1330	.	.	.	.	.	.	.	.						.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.																																		.	.	.	1360	.	.	.	.	.	.	.
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410		.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.		.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure																																												.																							.
Query SS confidence																																												.																							.
Query Sequence		V	A	K	L	A	G	G	V	A	V	I	K	V	G	A	A	T	E	V	E	M	K	E	K	K	A	R	V	E	D	A	L	H	A	T	R	A	A	V	E	E	G	.	V	V	A	G	G	G	V	A	L	I	R	V	A	S	K	L	A	D	L	R	G	Q	.	N	E	D	Q	N	V	G	I	K	V	A	L	R	A
Query Conservation																																												.																							.
Alig confidence																																												.																							.
Template Conservation
Template Sequence		L	D	N	G	S	G	K	A	C	T	I	M	L	R	G	G	S	K	D	I	L	N	E	I	D	R	N	L	Q	D	A	M	A	V	A	R	N	V	M	L	S	P	S	L	S	P	G	G	G	A	T	E	M	A	V	S	V	K	L	A	E	K	A	K	Q	L	E	G	I	Q	Q	W	P	Y	Q	A	V	A	D	A
Template Known Secondary structure								S									S	S	T	T	T																											T	T	T																	S		S	T	T
Template Predicted Secondary structure
Template SS confidence
		1368	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.
		447	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.					470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.
Predicted Secondary structure																									.	.	.	.
Query SS confidence																									.	.	.	.
Query Sequence		M	E	A	P	L	R	Q	I	V	L	N	C	G	E	E	P	S	V	V	A	N	T	V	.	.	.	.	K	G	G	D	G	N	Y	G	Y	N	A	A	T	E	E	Y	G	N	M	I	D	M	G	I	L	D	P	T	K	V	T	R	S	A	L	Q	Y	A	A	S	V	A	G	L	M	I	T	T	E	C	M	V	T
Query Conservation																									.	.	.	.
Alig confidence																									.	.	.	.
Template Conservation
Template Sequence		M	E	C	I	P	R	T	L	I	Q	N	A	G	G	D	P	I	R	L	L	S	Q	L	R	A	K	H	A	Q	G	N	F	T	T	G	I	D	G	D	K	G	K	I	V	D	M	V	S	Y	G	I	W	E	P	E	V	I	K	Q	Q	S	V	K	T	A	I	E	S	A	C	L	L	L	R	V	D	D	I	V	S
Template Known Secondary structure		T	T									T	T		S														T	T	S		T	T		B			T	T	S	S	S		B		T	T	T	T	T																						T	T	S					B
Template Predicted Secondary structure
Template SS confidence
		1449	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.
		523	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1529	1530	.