Job Description P0A6F5 Confidence 100.00% Date Wed Jan 25 15:20:15 GMT 2012 Rank 25 Aligned Residues 461 % Identity 22% Template c3p9eb_ PDB info PDB header:chaperone Chain: B: PDB Molecule: PDBTitle: the crystal structure of yeast cct reveals intrinsic asymmetry of2 eukaryotic cytosolic chaperonins Resolution 3.80 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		G	N	D	A	R	V	K	M	L	R	G	V	N	V	L	A	D	A	V	K	V	T	L	G	P	K	G	R	N	V	V	L	D	K	S	F	G	A	.	P	T	I	T	K	D	G	V	S	V	A	R	E	I	E	L	E	D	K	F	E	N	M	G	A	Q	M	V	K	E	V	A	S	K	A	N	D	A	A	G	D
Query Conservation																																								.
Alig confidence																																								.																		.	.	.	.
Template Conservation																																																										.	.	.	.
Template Sequence		A	E	N	A	R	L	S	A	F	V	G	A	I	A	V	G	D	L	V	K	S	T	L	G	P	K	G	M	D	K	L	L	Q	S	A	S	S	N	T	C	M	V	T	N	D	G	A	T	I	L	K	S	I	P	L	D	.	.	.	.	N	P	A	A	K	V	L	V	N	I	S	K	V	Q	D	D	E	V	G	D
Template Known Secondary structure		S																				S		S	S	S	S									T	T	T															T					.	.	.	.																		T		S
Template Predicted Secondary structure																																																										.	.	.	.
Template SS confidence
		1015	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070					.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.						.	.	.	.	.	.	.	.	150	.	.	.	.	.							.
Predicted Secondary structure																																																								.	.	.	.	.															.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.															.	.	.	.	.	.
Query Sequence		G	T	T	T	A	T	V	L	A	Q	A	I	I	T	E	G	L	K	A	V	A	A	G	M	N	P	M	D	L	K	R	G	I	D	K	A	V	T	A	A	V	E	E	L	K	A	L	S	V	P	C	S	D	S	.	.	.	.	.	K	A	I	A	Q	V	G	T	I	S	A	N	S	D	.	.	.	.	.	.	E
Query Conservation																																																								.	.	.	.	.															.	.	.	.	.	.
Alig confidence																						.	.																																	.	.	.	.	.															.	.	.	.	.	.
Template Conservation																						.	.
Template Sequence		G	T	T	S	V	T	V	L	S	A	E	L	L	R	E	A	E	K	L	I	.	.	D	I	H	P	Q	T	I	I	E	G	Y	R	L	A	S	A	A	A	L	D	A	L	T	K	A	A	V	D	N	S	H	D	K	T	M	F	R	E	D	L	I	H	I	A	K	T	T	L	S	S	K	I	L	S	Q	D	K	D
Template Known Secondary structure			T	T	T	T	T														T	.	.																									T		B																						T	T	S	G	G	G	G	G
Template Predicted Secondary structure																						.	.
Template SS confidence
		1091	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110			.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.					170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.																																																											.	.	.	.	.
Query SS confidence															.	.	.	.																																																											.	.	.	.	.
Query Sequence		T	V	G	K	L	I	A	E	A	M	D	K	V	.	.	.	.	G	K	E	G	V	I	T	V	E	D	G	T	G	L	Q	D	E	L	D	V	V	E	G	M	Q	F	D	R	G	Y	L	S	P	Y	F	I	N	K	P	E	T	G	A	V	E	L	E	S	P	F	I	L	L	A	D	K	K	I	.	.	.	.	.
Query Conservation															.	.	.	.																																																											.	.	.	.	.
Alig confidence															.	.	.	.																																	.																										.	.	.	.	.
Template Conservation																																																			.
Template Sequence		H	F	A	E	L	A	T	N	A	I	L	R	L	K	G	S	T	N	L	E	H	I	Q	I	I	K	I	L	G	G	K	L	S	D	S	F	L	D	E	G	F	I	L	A	K	K	F	G	N	.	N	Q	P	K	R	I	E	N	A	K	I	L	I	A	N	T	T	L	D	T	D	K	V	K	I	F	G	T	K	F
Template Known Secondary structure													T	T		T	T			T	T	S	S				B				S	S	S	S						S	S				S				S	S	.	S			S			S	S								S		S	S					S	S
Template Predicted Secondary structure																																																			.
Template SS confidence
		1172	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220		.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250
															228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	S	N	I	R	E	M	L	P	V	L	E	A	V	A	K	A	G	K	P	L	L	I	I	A	E	D	V	E	G	E	A	L	A	T	L	V	V	N	T	M	R	G	I	V	K	V	A	A	V	K	A	P	G	F	G	D	R	R	K	A	M	L	Q	D	I	A	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	D	S	T	A	K	L	A	Q	L	E	K	A	E	R	E	K	M	K	N	K	I	A	K	I	S	K	F	G	I	N	T	F	I	N	R	Q	L	I	Y	D	Y	P	E	Q	L	F	T	D	L	G	I	N	S	I	E	H	A	.	.	.	.	.	.	.	.	.	.	.	D	F	E	G	V	E	R	L	A	L
Template Known Secondary structure																												T	T	T			B				S	S				T	T	T								T		B							.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1251	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.												1310	.	.	.	.	.	.	.	.	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	G	G	T	V	I	S	E	E	I	G	M	E	L	E	K	A	T	L	E	D	L	G	Q	A	K	R	V	V	I	N	K	D	T	T	T	I	I	D	G	V	G	E	E	A	A	I	Q	G	R	V	A	Q	I	R	Q	Q	I	E	E	A	T	S	D	Y	D	R	E	K	L	Q	E	R	V	A	K	L	A	G
Query Conservation
Alig confidence										.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	T	G	G	E	V	V	S	.	.	.	.	.	T	F	D	E	P	S	K	C	K	L	G	E	C	D	V	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	M	L	G	E	Q	P	F	L	K	F	S	G	C	K	A	G
Template Known Secondary structure			T						S	.	.	.	.	.	T	T	S			T	T	S					S	B			B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S	S			B			B		S	S			S
Template Predicted Secondary structure										.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1320	.	.	.	.	.	.	.						.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.																																	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410		.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.		.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
Predicted Secondary structure																																						.																							.
Query SS confidence																																						.																							.
Query Sequence		G	V	A	V	I	K	V	G	A	A	T	E	V	E	M	K	E	K	K	A	R	V	E	D	A	L	H	A	T	R	A	A	V	E	E	G	.	V	V	A	G	G	G	V	A	L	I	R	V	A	S	K	L	A	D	L	R	G	Q	.	N	E	D	Q	N	V	G	I	K	V	A	L	R	A	M	E	A	P	L	R
Query Conservation																																						.																							.
Alig confidence																																						.																							.
Template Conservation
Template Sequence		E	A	C	T	I	V	L	R	G	A	T	D	Q	T	L	D	E	A	E	R	S	L	H	D	A	L	S	V	L	S	Q	T	T	K	E	T	R	T	V	L	G	G	G	C	A	E	M	V	M	S	K	A	V	D	T	E	A	Q	N	I	D	G	K	K	S	L	A	V	E	A	F	A	R	A	L	R	Q	L	P	T
Template Known Secondary structure							B			T	T		T	T							T																					T	T	T																			S
Template Predicted Secondary structure
Template SS confidence
		1363	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.
		453	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.					.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.
Predicted Secondary structure																					.	.	.	.
Query SS confidence																					.	.	.	.
Query Sequence		Q	I	V	L	N	C	G	E	E	P	S	V	V	A	N	T	V	K	G	.	.	.	.	G	D	G	N	Y	G	Y	N	A	A	T	E	E	Y	G	N	M	I	D	M	G	I	L	D	P	T	K	V	T	R	S	A	L	Q	Y	A	A	S	V	A	G	L	M	I	T	T	E	C	M	V	T	D	L
Query Conservation																					.	.	.	.
Alig confidence																					.	.	.	.
Template Conservation
Template Sequence		I	L	A	D	N	A	G	F	D	S	S	E	L	V	S	K	L	R	S	S	I	Y	N	G	I	S	T	S	G	L	D	L	N	N	G	T	I	A	D	M	R	Q	L	G	I	V	E	S	Y	K	L	K	R	A	V	V	S	S	A	S	E	A	A	E	V	L	L	R	V	D	N	I	I	R	A	R
Template Known Secondary structure								T	S		S														T		S						S	S	S	T	T								T					T	T
Template Predicted Secondary structure
Template SS confidence
		1443	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.