Job Description P0A6F5 Confidence 100.00% Date Wed Jan 25 15:20:15 GMT 2012 Rank 19 Aligned Residues 474 % Identity 21% Template c3p9dL_ PDB info PDB header:chaperone Chain: L: PDB Molecule:t-complex protein 1 subunit delta; PDBTitle: the crystal structure of yeast cct reveals intrinsic asymmetry of2 eukaryotic cytosolic chaperonins Resolution 3.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	K	D	V	K	F	G	N	D	A	R	V	K	M	L	R	G	V	N	V	L	A	D	A	V	K	V	T	L	G	P	K	G	R	N	V	V	L	D	K	S	F	G	A	P	T	I	T	K	D	G	V	S	V	A	R	E	I	E	L	E	D	K	F	E	N	M	G	A	Q	M	V	K	E	V	A	S	K	A
Query Conservation
Alig confidence																																																																.	.	.	.
Template Conservation																																																																.	.	.	.
Template Sequence		T	F	K	N	K	E	K	P	Q	E	V	R	K	A	N	I	I	A	A	R	S	V	A	D	A	I	R	T	S	L	G	P	K	G	M	D	K	M	I	K	T	S	R	G	E	I	I	I	S	N	D	G	H	T	I	L	K	Q	M	A	I	L	.	.	.	.	H	P	V	A	R	M	L	V	E	V	S	A	A	Q
Template Known Secondary structure		S	S		B																							T	T	T	S	S	T	T									S	S																S				.	.	.	.		T	T
Template Predicted Secondary structure																																																																.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.					.	.	.	.	.	.	.	.	80	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																																												.	.																	.	.	.	.
Query SS confidence																																																												.	.																	.	.	.	.
Query Sequence		N	D	A	A	G	D	G	T	T	T	A	T	V	L	A	Q	A	I	I	T	E	G	L	K	A	V	A	A	G	M	N	P	M	D	L	K	R	G	I	D	K	A	V	T	A	A	V	E	E	L	K	A	L	S	V	P	C	S	.	.	D	S	K	A	I	A	Q	V	G	T	I	S	A	N	S	D	.	.	.	.
Query Conservation																																																												.	.																	.	.	.	.
Alig confidence																																																												.	.																	.	.	.	.
Template Conservation
Template Sequence		D	S	E	A	G	D	G	T	T	S	V	V	I	L	T	G	A	L	L	G	A	A	E	R	L	L	N	K	G	I	H	P	T	I	I	A	D	S	F	Q	S	A	A	K	R	S	V	D	I	L	L	E	M	C	H	K	V	S	L	S	D	R	E	Q	L	V	R	A	A	S	T	S	L	S	S	K	I	V	S	Q
Template Known Secondary structure					T		S		S																			T	T	T																							T	T						S														S		S	S	S		S	T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
				156	.	.	.	160	.	.	.	.	.	.	.	.	.									170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure		.	.															.	.	.	.	.	.	.	.																																.
Query SS confidence		.	.															.	.	.	.	.	.	.	.																																.
Query Sequence		.	.	E	T	V	G	K	L	I	A	E	A	M	D	K	V	.	.	.	.	.	.	.	.	G	K	E	G	V	I	T	V	E	D	G	T	G	L	Q	D	E	L	D	V	V	E	G	M	Q	F	D	R	G	Y	L	.	S	P	Y	F	I	N	K	P	E	T	G	A	V	E	L	E	S	P	F	I	L	L	A	D
Query Conservation		.	.															.	.	.	.	.	.	.	.																																.
Alig confidence		.	.															.	.	.	.	.	.	.	.																																.
Template Conservation
Template Sequence		Y	S	S	F	L	A	P	L	A	V	D	S	V	L	K	I	S	D	E	N	S	K	N	V	D	L	N	D	I	R	L	V	K	K	V	G	G	T	I	D	D	T	E	M	I	D	G	V	V	L	T	Q	T	A	I	K	S	A	G	G	P	T	R	K	E	K	A	K	I	G	L	I	Q	F	Q	I	S	P	P	K
Template Known Secondary structure		T														T	T			T	T	T	T				G	G	G	S	B						S	S		S							S	S		B								S	S	S			S			S	S										S	S
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		225	.	.	.	.	230																		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.						.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Query Sequence		K	K	I	S	N	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	M	L	P	V	L	E	A	V	A	K	A	G	K	P	L	L	I	I	A	E	D	V	.	.	.	.	.	E	G	E	A	L	A	T	L	V	V	N	T	M	R	G	I	V	K	V	A	A	V	K	A	P	G	F	G
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		P	D	T	E	N	N	I	I	V	N	D	Y	R	Q	M	D	K	I	L	K	E	E	R	A	Y	L	L	N	I	C	K	K	I	K	K	A	K	C	N	V	L	L	I	Q	K	S	I	L	R	D	A	V	N	D	L	A	L	H	F	L	S	K	L	N	I	M	V	V	K	D	I	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S	S							S	S	S	S						T																	T	T							S	S		S		T	T	S		S								T	T	T	S								.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	R	K	A	M	L	Q	D	I	A	T	L	T	G	G	T	V	I	S	E	E	I	G	M	E	L	E	K	A	T	L	E	D	L	G	Q	A	K	R	V	V	I	N	K	D	T	T	T	I	I	D	G	V	G	E	E	A	A	I	Q	G	R	V	A	Q	I	R	Q	Q	I	E	E	A	T	S	D	Y	D	R
Query Conservation
Alig confidence		.	.																				.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																				.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	E	R	E	E	I	E	F	L	S	K	G	L	G	C	K	P	I	A	D	.	.	I	E	L	F	T	E	D	R	L	D	S	A	D	L	V	E	E	I	D	S	D	G	S	K	I	V	R	V	T	G	I	R	N	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.		T											T					S		.	.	S	T	T			S	S	S					S								T	T					B		T	T	B			G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.																				.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.			.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410		.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.		.	.	.	.	.	.	.	440
Predicted Secondary structure																																																		.																							.
Query SS confidence																																																		.																							.
Query Sequence		E	K	L	Q	E	R	V	A	K	L	A	G	G	V	A	V	I	K	V	G	A	A	T	E	V	E	M	K	E	K	K	A	R	V	E	D	A	L	H	A	T	R	A	A	V	E	E	G	.	V	V	A	G	G	G	V	A	L	I	R	V	A	S	K	L	A	D	L	R	G	Q	.	N	E	D	Q	N	V	G	I
Query Conservation																																																		.																							.
Alig confidence		.	.	.	.	.	.	.	.	.																																								.																							.
Template Conservation		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	N	A	R	P	T	V	S	V	V	I	R	G	A	N	N	M	I	I	D	E	T	E	R	S	L	H	D	A	L	C	V	I	R	C	L	V	K	E	R	G	L	I	A	G	G	G	A	P	E	I	E	I	S	R	R	L	S	K	E	A	R	S	M	E	G	V	Q	A	F	I	W
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	G	G											S	S	T	T										T	T	T										S	S					T	T	T															T	T	S						T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Template SS confidence
											370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440
		441	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470					.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.
Query SS confidence																																.	.	.	.
Query Sequence		K	V	A	L	R	A	M	E	A	P	L	R	Q	I	V	L	N	C	G	E	E	P	S	V	V	A	N	T	V	K	.	.	.	.	G	G	D	G	N	Y	G	Y	N	A	A	T	E	E	Y	G	N	M	I	D	M	G	I	L	D	P	T	K	V	T	R	S	A	L	Q	Y	A	A	S	V	A	G	L	M	I	T
Query Conservation																																.	.	.	.
Alig confidence																																.	.	.	.
Template Conservation
Template Sequence		Q	E	F	A	S	A	L	E	V	I	P	T	T	L	A	E	N	A	G	L	N	S	I	K	V	V	T	E	L	R	S	K	H	E	N	G	E	L	N	D	G	I	S	V	R	R	S	G	T	T	N	T	Y	E	E	H	I	L	Q	P	V	L	V	S	T	S	A	I	T	L	A	S	E	C	V	K	S	I	L	R
Template Known Secondary structure									T									T	T	S	S										T	T				S	S	S							S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		441	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520
		517	.	.	520	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	C	M	V	T	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	D	D	I	A	F	S	R
Template Known Secondary structure			S				B
Template Predicted Secondary structure
Template SS confidence
		521	.	.	.	.	.	.	.