Job Description P0A6F5 Confidence 100.00% Date Wed Jan 25 15:20:15 GMT 2012 Rank 13 Aligned Residues 484 % Identity 23% Template c3losC_ PDB info PDB header:chaperone Chain: C: PDB Molecule:chaperonin; PDBTitle: atomic model of mm-cpn in the closed state Resolution 4.30 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	K	D	V	K	F	G	N	D	A	R	V	K	M	L	R	G	V	N	V	L	A	D	A	V	K	V	T	L	G	P	K	G	R	N	V	V	L	D	K	S	F	G	A	P	T	I	T	K	D	G	V	S	V	A	R	E	I	E	L	E	D	K	F	E	N	M	G	A	Q	M	V	K	E	V	A	S	K	A
Query Conservation
Alig confidence																																																																.	.	.	.
Template Conservation																																																																.	.	.	.
Template Sequence		E	N	M	K	R	Y	M	G	R	D	A	Q	R	M	N	I	L	A	G	R	I	I	A	E	T	V	R	S	T	L	G	P	K	G	M	D	K	M	L	V	D	D	L	G	D	V	V	V	T	N	D	G	V	T	I	L	R	E	M	S	V	E	.	.	.	.	H	P	A	A	K	M	L	I	E	V	A	K	T	Q
Template Known Secondary structure		S		S			S		S	T	T																		T	T		T	T	S				B					S	S					B	S	S								S	S			S	.	.	.	.	S	T	T	T	T	T	T	T
Template Predicted Secondary structure																																																																.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.					.	.	.	.	.	.	.	.	80	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																																												.	.																	.	.	.	.
Query SS confidence																																																												.	.																	.	.	.	.
Query Sequence		N	D	A	A	G	D	G	T	T	T	A	T	V	L	A	Q	A	I	I	T	E	G	L	K	A	V	A	A	G	M	N	P	M	D	L	K	R	G	I	D	K	A	V	T	A	A	V	E	E	L	K	A	L	S	V	P	C	S	.	.	D	S	K	A	I	A	Q	V	G	T	I	S	A	N	S	D	.	.	.	.
Query Conservation																																																												.	.																	.	.	.	.
Alig confidence																																																												.	.																	.	.	.	.
Template Conservation
Template Sequence		E	K	E	V	G	D	G	T	T	T	A	V	V	V	A	G	E	L	L	R	K	A	E	E	L	L	D	Q	N	V	H	P	T	I	V	V	K	G	Y	Q	A	A	A	Q	K	A	Q	E	L	L	K	T	I	A	C	E	V	G	A	Q	D	K	E	I	L	T	K	I	A	M	T	S	I	T	G	K	G	A	E	K
Template Known Secondary structure			S	S			S																			S	S	T	T		S		T																			B					S	S		S		S													T	T	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
				156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.								.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure		.	.																			.	.	.	.	.	.	.
Query SS confidence		.	.																			.	.	.	.	.	.	.
Query Sequence		.	.	E	T	V	G	K	L	I	A	E	A	M	D	K	V	G	K	E	G	.	.	.	.	.	.	.	V	I	T	V	E	D	G	T	G	L	Q	D	E	L	D	V	V	E	G	M	Q	F	D	R	G	Y	L	S	P	Y	F	I	N	K	P	E	T	G	A	V	E	L	E	S	P	F	I	L	L	A	D	K	K
Query Conservation		.	.																			.	.	.	.	.	.	.
Alig confidence		.	.																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	K	E	K	L	A	E	I	I	V	E	A	V	S	A	V	V	D	D	E	G	K	V	D	K	D	L	I	K	I	E	K	K	S	G	A	S	I	D	D	T	E	L	I	K	G	V	L	V	D	K	E	R	V	S	A	Q	M	P	K	K	V	T	D	A	K	I	A	L	L	N	C	A	I	E	I	K	E	T	E
Template Known Secondary structure		S	S	T	T																S	S	S								S		S			S	S	S		S	S					T	T						S	S			S	S	S	T	T	S		S	S			S											S		S
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		227	.	.																		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	S	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	R	E	M	L	P	V	L	E	A	V	A	K	A	G	K	P	L	L	I	I	A	E	D	V	E	G	E	A	L	A	T	L	V	V	N	T	M	R	G	I	V	K	V	A	A	V	K	A	P	G	F	G	D	R	R	K	A	M	L
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	D	A	E	I	R	I	T	D	P	A	K	L	M	E	F	I	E	Q	E	E	K	M	L	K	D	M	V	A	E	I	K	A	S	G	A	N	V	L	F	C	Q	K	G	I	D	D	L	A	Q	H	Y	L	A	K	E	G	I	V	A	A	R	R	V	.	.	.	.	.	.	.	.	.	.	.	K	K	S	D	M
Template Known Secondary structure					S	S				S		S			T	T																		T	T	S							T	T				T									T	S	S							.	.	.	.	.	.	.	.	.	.	.		S
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.												310	.	.	.	.
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	D	I	A	T	L	T	G	G	T	V	I	S	E	E	I	G	M	E	L	E	K	A	T	L	E	D	L	G	Q	A	K	R	V	V	I	N	K	D	T	T	T	I	I	D	G	V	G	E	E	A	A	I	Q	G	R	V	A	Q	I	R	Q	Q	I	E	E	A	T	S	D	Y	D	R	E	K	L	Q	E	R	V
Query Conservation
Alig confidence																							.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	K	L	A	K	A	T	G	A	N	V	I	T	N	I	K	D	L	S	A	Q	.	.	D	L	G	D	A	G	L	V	E	E	R	K	I	S	G	D	S	M	I	F	V	E	E	C	K	H	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								T				S			S	S	S				S		.	.			S			S						S	S	S	S	S											S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.			.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410		.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.		.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure																																											.																							.
Query SS confidence																																											.																							.
Query Sequence		A	K	L	A	G	G	V	A	V	I	K	V	G	A	A	T	E	V	E	M	K	E	K	K	A	R	V	E	D	A	L	H	A	T	R	A	A	V	E	E	G	.	V	V	A	G	G	G	V	A	L	I	R	V	A	S	K	L	A	D	L	R	G	Q	.	N	E	D	Q	N	V	G	I	K	V	A	L	R	A	M
Query Conservation																																											.																							.
Alig confidence		.	.	.	.	.																																					.																							.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	K	A	V	T	M	L	I	R	G	T	T	E	H	V	I	E	E	V	A	R	A	V	D	D	A	V	G	V	V	G	C	T	I	E	D	G	R	I	V	S	G	G	G	S	T	E	V	E	L	S	M	K	L	R	E	Y	A	E	G	I	S	G	R	E	Q	L	A	V	R	A	F	A	D	A	L
Template Known Secondary structure		.	.	.	.	.	S	S								S																							T	S	S	S		B			B	S	T	T	T	T	T	T								G	G	G	S			S	T	T	T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
		448	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470						.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.
Predicted Secondary structure																									.	.	.	.	.
Query SS confidence																									.	.	.	.	.
Query Sequence		E	A	P	L	R	Q	I	V	L	N	C	G	E	E	P	S	V	V	A	N	T	V	K	.	.	.	.	.	G	G	D	G	N	Y	G	Y	N	A	A	T	E	E	Y	G	N	M	I	D	M	G	I	L	D	P	T	K	V	T	R	S	A	L	Q	Y	A	A	S	V	A	G	L	M	I	T	T	E	C	M	V	T
Query Conservation																									.	.	.	.	.
Alig confidence																									.	.	.	.	.
Template Conservation
Template Sequence		E	V	I	P	R	T	L	A	E	N	A	G	L	D	A	I	E	I	L	V	K	V	R	A	A	H	A	S	N	G	N	K	C	A	G	L	N	V	F	T	G	A	V	E	D	M	C	E	N	G	V	V	E	P	L	R	V	K	T	Q	A	I	Q	S	A	A	E	S	T	E	M	L	L	R	I	D	D	V	I	A
Template Known Secondary structure									T			S	S	S	S	S	S	T	T						T	T		S	S	S								S	S	S				S		S	S	S			B	S		S	S		T	T															T	S	S			S
Template Predicted Secondary structure
Template SS confidence
		438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.
		523	.	.	.	.	.	.	530	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	P	K	N	D	A	A	D	L	G	A	A	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	K	L	R	G	A	P	D	M	G	D	M	G	G
Template Known Secondary structure						S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		518	.	520	.	.	.	.	.	.	.	.	.	530	.	.