Job Description P0A6F5 Confidence 100.00% Date Wed Jan 25 15:20:15 GMT 2012 Rank 9 Aligned Residues 460 % Identity 22% Template c3ko1H_ PDB info PDB header:chaperone Chain: H: PDB Molecule:chaperonin; PDBTitle: cystal structure of thermosome from acidianus tengchongensis strain s5 Resolution 3.70 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	D	A	R	V	K	M	L	R	G	V	N	V	L	A	D	A	V	K	V	T	L	G	P	K	G	R	N	V	V	L	D	K	S	F	G	A	P	T	I	T	K	D	G	V	S	V	A	R	E	I	E	L	E	D	K	F	E	N	M	G	A	Q	M	V	K	E	V	A	S	K	A	N	D	A	A	G	D	G
Query Conservation
Alig confidence																																																									.	.	.	.
Template Conservation																																																									.	.	.	.
Template Sequence		G	K	E	A	V	R	A	N	I	A	A	V	K	A	V	E	E	A	L	K	S	T	Y	G	P	R	G	M	D	K	M	L	V	D	S	L	G	D	I	T	I	T	N	D	G	A	T	I	L	D	K	M	D	L	Q	.	.	.	.	H	P	A	A	K	L	L	V	Q	I	A	K	G	Q	D	E	E	T	A	D	G
Template Known Secondary structure																					G	G	G		S	T	T									T	T	S														S	S				.	.	.	.	S												T		S	S	S	S	S	T	T
Template Predicted Secondary structure																																																									.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.					.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.							.	.	.	.	160
Predicted Secondary structure																																																				.	.																		.	.	.	.	.	.
Query SS confidence																																																				.	.																		.	.	.	.	.	.
Query Sequence		T	T	T	A	T	V	L	A	Q	A	I	I	T	E	G	L	K	A	V	A	A	G	M	N	P	M	D	L	K	R	G	I	D	K	A	V	T	A	A	V	E	E	L	K	A	L	S	V	P	C	.	.	S	D	S	K	A	I	A	Q	V	G	T	I	S	A	N	S	D	.	.	.	.	.	.	E	T	V	G	K
Query Conservation																																																				.	.																		.	.	.	.	.	.
Alig confidence																																																				.	.																		.	.	.	.	.	.
Template Conservation
Template Sequence		T	K	T	A	V	I	F	S	G	E	L	V	K	K	A	E	D	L	L	Y	K	D	V	H	P	T	I	I	I	S	G	Y	K	K	A	E	E	V	A	L	Q	T	I	Q	E	L	A	Q	T	V	S	I	N	D	T	D	L	L	R	K	I	A	M	T	S	L	S	S	K	A	V	A	G	A	R	E	Y	I	A	D
Template Known Secondary structure																						T	T																							T	T						T	T														T	T	S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		161	.	.	.	.	.	.	.	.	170	.											.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.																																																											.
Query SS confidence													.	.	.	.	.	.	.	.	.	.																																																											.
Query Sequence		L	I	A	E	A	M	D	K	V	G	K	.	.	.	.	.	.	.	.	.	.	E	G	V	I	T	V	E	D	G	T	G	L	Q	D	E	L	D	V	V	E	G	M	Q	F	D	R	G	Y	L	S	P	Y	F	I	N	K	P	E	T	G	A	V	E	L	E	S	P	F	I	L	L	A	D	K	K	I	S	N	.
Query Conservation													.	.	.	.	.	.	.	.	.	.																																																											.
Alig confidence													.	.	.	.	.	.	.	.	.	.																																																											.
Template Conservation
Template Sequence		I	V	V	K	A	V	T	Q	V	A	E	L	R	G	D	K	W	Y	V	D	L	D	N	I	Q	I	V	K	K	A	G	G	S	I	N	D	T	Q	L	V	Y	G	I	V	V	D	K	E	V	V	H	P	G	M	P	K	R	L	E	N	A	K	I	A	L	I	D	A	S	L	E	V	E	K	P	E	L	D	A	E
Template Known Secondary structure														T	T	S	S					G	G	G									S		G	G	G					S						S		B	S		T	T	S		S			B	S								S		B	S					T	T	T
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
																		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	R	E	M	L	P	V	L	E	A	V	A	K	A	G	K	P	L	L	I	I	A	E	D	V	E	G	E	A	L	A	T	L	V	V	N	T	M	R	G	I	V	K	V	A	A	V	K	A	P	G	F	G	D	R	R	K	A	M	L	Q	D	I	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	R	I	N	D	P	T	Q	M	Q	K	F	L	D	E	E	E	N	L	I	K	E	K	V	D	K	I	L	A	T	G	A	N	V	I	I	C	Q	K	G	I	D	E	V	A	Q	S	Y	L	A	K	K	G	V	L	A	V	R	R	A	.	.	.	.	.	.	.	.	.	.	.	K	K	S	D	L	E	K	L	A
Template Known Secondary structure						S																								T	T			S					S	S		B		S										T								.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.												.	.	.	.	.	.	330	.	.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.				.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure																																.	.	.
Query SS confidence																																.	.	.
Query Sequence		T	L	T	G	G	T	V	I	S	E	E	I	G	M	E	L	E	K	A	T	L	E	D	L	G	Q	A	K	R	V	.	.	.	V	I	N	K	D	T	T	T	I	I	D	G	V	G	E	E	A	A	I	Q	G	R	V	A	Q	I	R	Q	Q	I	E	E	A	T	S	D	Y	D	R	E	K	L	Q	E	R	V	A
Query Conservation																																.	.	.
Alig confidence											.	.	.	.	.																	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	A	T	G	G	R	V	V	S	.	.	.	.	.	N	I	D	E	I	S	E	Q	D	L	G	Y	A	S	L	I	E	E	R	K	V	G	E	D	K	M	V	F	V	E	G	A	K	N	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T	T	T					S	.	.	.	.	.		G	G	G			S	S	S	S				S								S	S	S							S		S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		333	.	.	.	.	.	.	340	.						.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410		.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.		.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.																							.
Query SS confidence																																										.																							.
Query Sequence		K	L	A	G	G	V	A	V	I	K	V	G	A	A	T	E	V	E	M	K	E	K	K	A	R	V	E	D	A	L	H	A	T	R	A	A	V	E	E	G	.	V	V	A	G	G	G	V	A	L	I	R	V	A	S	K	L	A	D	L	R	G	Q	.	N	E	D	Q	N	V	G	I	K	V	A	L	R	A	M	E
Query Conservation																																										.																							.
Alig confidence		.	.	.	.																																					.																							.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	K	S	I	S	I	L	I	R	G	G	L	E	R	L	V	D	E	T	E	R	A	L	R	D	A	L	G	T	V	A	D	V	I	K	D	G	R	A	I	A	G	G	G	A	V	E	I	E	I	A	K	K	L	R	K	Y	A	P	Q	V	G	G	K	E	Q	L	A	V	E	A	Y	A	N	A	L	E
Template Known Secondary structure		.	.	.	.	S									S	S	T	T																												T	T	T																			S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
		449	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470						.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.
Predicted Secondary structure																								.	.	.	.	.
Query SS confidence																								.	.	.	.	.
Query Sequence		A	P	L	R	Q	I	V	L	N	C	G	E	E	P	S	V	V	A	N	T	V	K	.	.	.	.	.	G	G	D	G	N	Y	G	Y	N	A	A	T	E	E	Y	G	N	M	I	D	M	G	I	L	D	P	T	K	V	T	R	S	A	L	Q	Y	A	A	S	V	A	G	L	M	I	T	T	E	C	M	V	T	D
Query Conservation																								.	.	.	.	.
Alig confidence																								.	.	.	.	.
Template Conservation
Template Sequence		S	L	V	S	I	L	I	E	N	A	G	F	D	P	I	D	L	L	M	K	L	R	S	T	H	E	N	E	N	N	K	W	Y	G	I	D	L	Y	A	G	Q	P	V	D	M	W	Q	K	G	V	I	E	P	A	L	V	K	M	N	A	I	K	A	A	T	E	A	A	T	L	V	L	R	I	D	D	V	V	S	A
Template Known Secondary structure												T	S												T	T		S	G	G	G	T	T					T	T	T	T					S	G	G	G	S					T	T
Template Predicted Secondary structure
Template SS confidence
		453	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.