Job Description P0A6F5 Confidence 100.00% Date Wed Jan 25 15:20:15 GMT 2012 Rank 18 Aligned Residues 470 % Identity 17% Template c3iygZ_ PDB info PDB header:chaperone Chain: Z: PDB Molecule:t-complex protein 1 subunit zeta; PDBTitle: ca model of bovine tric/cct derived from a 4.0 angstrom2 cryo-em map Resolution 4.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	K	D	V	K	F	G	N	D	A	R	V	K	M	L	R	G	V	N	V	L	A	D	A	V	K	V	T	L	G	P	K	G	R	N	V	V	L	D	K	S	F	G	A	P	T	I	T	K	D	G	V	S	V	A	R	E	I	E	L	E	D	K	F	E	N	M	G	A	Q	M	V	K	E	V	A	S	K	A
Query Conservation
Alig confidence																																																																.	.	.	.
Template Conservation																																																																.	.	.	.
Template Sequence		P	K	A	E	V	A	R	A	Q	A	A	L	A	V	N	I	S	A	A	R	G	L	Q	D	V	L	R	T	N	L	G	P	K	G	T	M	K	M	L	V	S	G	A	G	D	I	K	L	T	K	D	G	N	V	L	L	H	E	M	Q	I	Q	.	.	.	.	H	P	T	A	S	L	I	A	K	V	A	T	A	Q
Template Known Secondary structure									S	S	T																T	T	S		S	S	T	T									S	T	T							S					T	T		S				.	.	.	.
Template Predicted Secondary structure																																																																.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.					.	.	.	.	.	.	.	70	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																																												.																	.	.	.	.	.
Query SS confidence																																																												.																	.	.	.	.	.
Query Sequence		N	D	A	A	G	D	G	T	T	T	A	T	V	L	A	Q	A	I	I	T	E	G	L	K	A	V	A	A	G	M	N	P	M	D	L	K	R	G	I	D	K	A	V	T	A	A	V	E	E	L	K	A	L	S	V	P	C	S	.	D	S	K	A	I	A	Q	V	G	T	I	S	A	N	S	D	.	.	.	.	.
Query Conservation																																																												.																	.	.	.	.	.
Alig confidence																																																												.																	.	.	.	.	.
Template Conservation
Template Sequence		D	D	I	T	G	D	G	T	T	S	N	V	L	I	I	G	E	L	L	K	Q	A	D	L	Y	I	S	E	G	L	H	P	R	I	I	T	E	G	F	E	A	A	K	E	K	A	L	Q	F	L	E	Q	V	K	V	S	K	E	M	D	R	E	T	L	I	D	V	A	R	T	S	L	R	T	K	V	H	A	E	L
Template Known Secondary structure					S		S		T																				T		S		S																					S		B			S	S										T	T	S	S	T	T		S	T	T
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
			156	.	.	.	160	.	.	.	.	.	.								.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure		.												.	.	.	.	.	.	.
Query SS confidence		.												.	.	.	.	.	.	.
Query Sequence		.	E	T	V	G	K	L	I	A	E	A	M	.	.	.	.	.	.	.	D	K	V	G	K	E	G	V	I	T	V	E	D	G	T	G	L	Q	D	E	L	D	V	V	E	G	M	Q	F	D	R	G	Y	L	S	P	Y	F	I	N	K	P	E	T	G	A	V	E	L	E	S	P	F	I	L	L	A	D	K	K	I
Query Conservation		.												.	.	.	.	.	.	.
Alig confidence		.												.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	D	V	L	T	E	A	V	V	D	S	I	L	A	I	K	K	Q	D	E	P	I	D	L	F	M	V	E	I	M	E	M	K	H	K	S	E	T	D	T	S	L	I	R	G	L	V	L	D	H	G	A	R	H	P	D	M	K	K	R	V	E	D	A	Y	I	L	T	C	N	V	S	L	E	Y	E	K	T	E	V
Template Known Secondary structure													T					S	S				S	S	S	S	S								S	S		S	T	T					S	S					S			S		G	G	G		S			S	S							S	S		S	S				S	S	S
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		228	.																		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.										.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.
Query Sequence		S	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	R	E	M	L	P	V	L	E	A	V	A	K	A	G	K	P	.	.	.	.	.	.	.	.	.	L	L	I	I	A	E	D	V	E	G	E	A	L	A	T	L	V	V	N	T	M	R	G	I	V	K	V	A	A	V	K	A	P	G	F
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		N	S	G	F	F	Y	K	S	A	E	E	R	E	K	L	V	K	A	E	R	K	F	I	E	D	R	V	K	K	I	I	E	L	K	K	K	V	C	G	D	S	D	K	G	F	V	V	I	N	Q	K	G	I	D	P	F	S	L	D	A	L	A	K	E	G	I	I	A	L	R	R	A	.	.	.	.	.	.	.	.
Template Known Secondary structure								S		S	S																				S	B		S			S	S	S			S	S	B		S					S	S																	B			S		.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	R	R	K	A	M	L	Q	D	I	A	T	L	T	G	G	T	V	I	S	E	E	I	G	M	E	L	E	K	A	T	L	E	D	L	G	Q	A	K	R	V	V	I	N	K	D	T	T	T	I	I	D	G	V	G	E	E	A	A	I	Q	G	R	V	A	Q	I	R	Q	Q	I	E	E	A	T	S	D	Y	D
Query Conservation
Alig confidence		.	.	.																						.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.																						.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	K	R	R	N	M	E	R	L	T	L	A	C	G	G	I	A	L	N	S	L	D	.	.	D	L	N	P	D	C	L	L	G	H	A	G	V	Y	E	Y	T	L	G	E	E	K	F	T	F	I	E	K	C	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.		S										T	T							S	T	.	.	T			T	T	T	T											S	T	T	S							S		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.																						.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
					309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.			330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410		.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.		.	.	.	.	.	.	.
Predicted Secondary structure																																																			.																							.
Query SS confidence																																																			.																							.
Query Sequence		R	E	K	L	Q	E	R	V	A	K	L	A	G	G	V	A	V	I	K	V	G	A	A	T	E	V	E	M	K	E	K	K	A	R	V	E	D	A	L	H	A	T	R	A	A	V	E	E	G	.	V	V	A	G	G	G	V	A	L	I	R	V	A	S	K	L	A	D	L	R	G	Q	.	N	E	D	Q	N	V	G
Query Conservation																																																			.																							.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																							.																							.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	N	P	R	S	V	T	L	L	I	K	G	P	N	K	H	T	L	T	Q	I	K	D	A	I	R	D	G	L	R	A	V	K	N	A	I	D	D	G	C	V	V	P	G	A	G	A	V	E	V	A	M	A	E	A	L	V	K	Y	K	P	S	V	K	G	R	A	Q	L	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.		T	T									S																										T		B		B													T	G	G	G	T	T	S	S		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470					.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.
Query SS confidence																																	.	.	.	.
Query Sequence		I	K	V	A	L	R	A	M	E	A	P	L	R	Q	I	V	L	N	C	G	E	E	P	S	V	V	A	N	T	V	K	.	.	.	.	G	G	D	G	N	Y	G	Y	N	A	A	T	E	E	Y	G	N	M	I	D	M	G	I	L	D	P	T	K	V	T	R	S	A	L	Q	Y	A	A	S	V	A	G	L	M	I
Query Conservation																																	.	.	.	.
Alig confidence																																	.	.	.	.
Template Conservation
Template Sequence		V	Q	A	F	A	D	A	L	L	I	I	P	K	V	L	A	Q	N	S	G	F	D	L	Q	E	T	L	V	K	V	Q	A	E	H	S	E	S	G	Q	L	V	G	V	D	L	N	T	G	E	P	M	V	A	A	E	A	G	I	W	D	N	Y	C	V	K	K	Q	L	L	H	S	C	T	V	I	A	T	N	I	L
Template Known Secondary structure									T	T										S	S	S		T												T	T	T	T		S					T	T	T	T	S								T		B			T	T
Template Predicted Secondary structure
Template SS confidence
		429	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.
		516	.	.	.	520	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	E	C	M	V	T	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	D	E	I	M	R	A
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		509	510	.	.	.	.	.	.