Job Description P0A6F5 Confidence 100.00% Date Wed Jan 25 15:20:15 GMT 2012 Rank 15 Aligned Residues 467 % Identity 21% Template c3iygG_ PDB info PDB header:chaperone Chain: G: PDB Molecule:t-complex protein 1 subunit gamma; PDBTitle: ca model of bovine tric/cct derived from a 4.0 angstrom2 cryo-em map Resolution 4.00 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	V	K	F	G	N	D	A	R	V	K	M	L	R	G	V	N	V	L	A	D	A	V	K	V	T	L	G	P	K	G	R	N	V	V	L	D	K	S	F	G	A	P	T	I	T	K	D	G	V	S	V	A	R	E	I	E	L	E	D	K	F	E	N	M	G	A	Q	M	V	K	E	V	A	S	K	A	N	D
Query Conservation
Alig confidence																																																														.	.	.	.
Template Conservation																																																														.	.	.	.
Template Sequence		T	K	R	E	S	G	R	K	V	Q	S	G	N	I	N	A	A	K	T	I	A	D	I	I	R	T	C	L	G	P	K	S	M	M	K	M	L	L	D	P	M	G	G	I	V	M	T	N	D	G	N	A	I	L	R	E	I	Q	V	Q	.	.	.	.	H	P	A	A	K	S	M	I	E	I	S	R	T	Q	D	E
Template Known Secondary structure							S	S	T	T																	T	T		S	S	S									S	S	S							S								S				.	.	.	.		T	T
Template Predicted Secondary structure																																																														.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.					.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																																									.	.																		.	.	.	.	.	.
Query SS confidence																																																									.	.																		.	.	.	.	.	.
Query Sequence		A	A	G	D	G	T	T	T	A	T	V	L	A	Q	A	I	I	T	E	G	L	K	A	V	A	A	G	M	N	P	M	D	L	K	R	G	I	D	K	A	V	T	A	A	V	E	E	L	K	A	L	S	V	P	C	.	.	S	D	S	K	A	I	A	Q	V	G	T	I	S	A	N	S	D	.	.	.	.	.	.
Query Conservation																																																									.	.																		.	.	.	.	.	.
Alig confidence																																																									.	.																		.	.	.	.	.	.
Template Conservation
Template Sequence		E	V	G	D	G	T	T	S	V	I	I	L	A	G	E	M	L	S	V	A	E	H	F	L	E	Q	Q	M	H	P	T	V	V	I	S	A	Y	R	K	A	L	D	D	M	I	S	T	L	K	K	I	S	I	P	V	D	T	S	N	R	D	T	M	L	N	I	I	N	S	S	I	T	T	K	V	I	S	R	W	S
Template Known Secondary structure			S		S																					T	T	T	S																							S						S	S													G	G	G	S				S
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.												.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	T	V	G	K	L	I	A	E	A	M	D	K	V	G	K	E	G	.	.	.	.	.	.	.	.	.	.	.	V	I	T	V	E	D	G	T	G	L	Q	D	E	L	D	V	V	E	G	M	Q	F	D	R	G	Y	L	S	P	Y	F	I	N	K	P	E	T	G	A	V	E	L	E	S	P	F	I	L	L	A	D
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	L	A	C	N	I	A	L	D	A	V	K	T	V	Q	F	E	E	N	G	R	K	E	I	D	I	K	K	Y	A	R	V	E	K	I	P	G	G	I	I	E	D	S	C	V	L	R	G	V	M	I	N	K	D	V	T	H	P	R	M	R	R	Y	I	K	N	P	R	I	V	L	L	D	S	S	L	E	Y	K	K
Template Known Secondary structure													T	T	S				B	T	T	B				S	S	S	S	S									S		S	S						S	S								S		S	S	S		S				S								S		S	S
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		225	.	.																		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	K	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	N	I	R	E	M	L	P	V	L	E	A	V	A	K	A	G	K	P	L	L	I	I	A	E	D	V	E	G	E	A	L	A	T	L	V	V	N	T	M	R	G	I	V	K	V	A	A	V	K	A	P	G	F	G	D	R	R	K	A
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	E	S	Q	T	D	I	E	I	T	R	E	E	D	F	T	R	I	L	Q	M	E	E	E	Y	I	Q	Q	L	C	E	D	I	I	Q	L	K	P	D	V	V	I	T	E	K	G	I	S	D	L	A	Q	H	Y	L	M	R	A	N	I	T	A	I	R	R	V	.	.	.	.	.	.	.	.	.	.	.	R	K	T
Template Known Secondary structure			T	T							S	S		S	T																						S			S					S	S				S									T	T						S		.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.												.	.	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.					.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure																																						.	.	.	.
Query SS confidence																																						.	.	.	.
Query Sequence		M	L	Q	D	I	A	T	L	T	G	G	T	V	I	S	E	E	I	G	M	E	L	E	K	A	T	L	E	D	L	G	Q	A	K	R	V	.	.	.	.	V	I	N	K	D	T	T	T	I	I	D	G	V	G	E	E	A	A	I	Q	G	R	V	A	Q	I	R	Q	Q	I	E	E	A	T	S	D	Y	D	R	E
Query Conservation																																						.	.	.	.
Alig confidence																	.	.	.	.	.																	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	N	N	R	I	A	R	A	C	G	A	R	I	V	S	.	.	.	.	.	R	P	E	E	L	R	E	E	D	V	G	T	G	A	G	L	L	E	I	K	K	I	G	D	E	Y	F	T	F	I	T	E	C	K	D	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										T	T					S	.	.	.	.	.	S	S	T	T	S		T	T	T						S								S	S	S							S		S	S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.						.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410		.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.		.	.	.	.	.	.	.	440	.
Predicted Secondary structure																																																	.																							.
Query SS confidence																																																	.																							.
Query Sequence		K	L	Q	E	R	V	A	K	L	A	G	G	V	A	V	I	K	V	G	A	A	T	E	V	E	M	K	E	K	K	A	R	V	E	D	A	L	H	A	T	R	A	A	V	E	E	G	.	V	V	A	G	G	G	V	A	L	I	R	V	A	S	K	L	A	D	L	R	G	Q	.	N	E	D	Q	N	V	G	I	K
Query Conservation																																																	.																							.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																																					.																							.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	K	A	C	T	I	L	L	R	G	A	S	K	E	I	L	S	E	V	E	R	N	L	Q	D	A	M	Q	V	C	R	N	V	L	L	D	P	Q	L	V	P	G	G	G	A	S	E	M	A	V	A	H	A	L	T	E	K	S	K	A	M	T	G	V	E	Q	W	P	Y	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	T											S	S																				T	T	S	S					T	T	T																T	S		T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
		442	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470						.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.
Query SS confidence																															.	.	.	.	.
Query Sequence		V	A	L	R	A	M	E	A	P	L	R	Q	I	V	L	N	C	G	E	E	P	S	V	V	A	N	T	V	K	.	.	.	.	.	G	G	D	G	N	Y	G	Y	N	A	A	T	E	E	Y	G	N	M	I	D	M	G	I	L	D	P	T	K	V	T	R	S	A	L	Q	Y	A	A	S	V	A	G	L	M	I	T
Query Conservation																															.	.	.	.	.
Alig confidence																															.	.	.	.	.
Template Conservation
Template Sequence		A	V	A	Q	A	L	E	V	I	P	R	T	L	I	Q	N	C	G	A	S	T	I	R	L	L	T	S	L	R	A	K	H	T	Q	E	N	C	E	T	W	G	V	N	G	E	T	G	T	L	V	D	M	K	E	L	G	I	W	E	P	L	A	V	K	L	Q	T	Y	K	T	A	V	E	T	A	V	L	L	L	R
Template Known Secondary structure							T	T	S	S							T	S	S	S														T	T	T	G	G	G	T					S	T	T	S	S								T																								T
Template Predicted Secondary structure
Template SS confidence
		427	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.
		517	.	.	520	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	C	M	V	T	D	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	D	D	I	V	S	G	H	K
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		507	.	.	510	.	.	.	.	.