 |
Job Description | P21514 | Confidence | 64.37% | Date | Thu Jan 5 11:38:25 GMT 2012 |
Rank | 202 | Aligned Residues | 137 |
% Identity | 18% | Template | d7reqa2 |
SCOP info | Flavodoxin-like
| Cobalamin (vitamin B12)-binding domain
| Cobalamin (vitamin B12)-binding domain
|
Resolution | 2.20 |
|
 |
  |   |
209 | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | |
260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  | . |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | G | F | E | K | E | C | L | N | L | V | N | K | L | G | N | D | K | I | K | L | V | L | E | L | T | E | R | N | P | I | P | V | T | P | E | A | R | A | I | F | D | S | L | H | Q | H | N | I | T | F | . |
A | L | D | D | F | G | T | G | Y | A | T | Y | R | Y | L | Q | A | F | P | V | D | F | I | K | I | D | K | S |
Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
| . |   |
|
|
|
|
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
Template Conservation |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
| . | . | . |
|
|   |   |
|   |
|   |
|   |   |
|   |   |   |
|
|   |   |
|   |   |   |
|   |
|
|
|   |
|
|   |   |   |
|   |
|   |   |   |   |   |
|   |   |   |   |
|
|
|
|   |
|
| . | . |
Template Sequence |   |
E | E | A | R | E | L | V | E | E | F | E | Q | A | E | G | R | R | P | R | I | L | . |
. |
. |
L | A | K | M | G | Q | D | G | H | D | R | G | Q | K | V | I | A | T | A | Y | A | D | L | G | F | D | V | D | V | G | P | L | F | Q | T | P | E | E | T | A | R | Q | A | V | E | A | D | V | H | V | V | G | V | S | . |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |
|
|  |  |  | . | . | . |  |  |
| B | T | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |
|
| T | T | B |
|  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  | . | . | . |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
581 | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | |
|
|
. | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | |
|
  |
  |   |
288 | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | |
|
|
. | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . |
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | V | Q | M | A | S | V | D | E | I | S | G | H | I | V | D | N | I | V | E | L | A | R | K | P | G | . |
. |
. |
L | S | I | V | A | E | G | V | E | T | Q | E | Q | A | D | L | M | I | G | K | G | V | H | F | L | Q | G | Y | L | Y | S | P | P | V | P | G | N | K | F | I | S | E | W | V | M | K |
Query Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
| . | . | . |
|   |
|
|
|   |
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
. | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |
|   |   |   |
|   |
|   |   |
|
|   |   |   |   |   |   |   |
|   |
|   |   |   |
|
|
|   |   | . | . | . | . |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
Template Sequence |   |
. |
. |
. |
. |
. |
S | L | A | G | G | H | L | T | L | V | P | A | L | R | K | E | L | D | K | L | G | R | P | D | I | L | I | T | V | G | G | V | I | P | E | Q | D | F | D | E | L | R | K | D | G | A | V | E | I | . |
. |
. |
. |
Y | T | P | G | T | V | I | P | E | S | A | I | S | L | V | K | K |
Template Known Secondary structure |   |
. | . | . | . | . |  |
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| T | T | S |  |  |  |  |  |  | S |
|
| G | G | G |  |  |  |  |  |  |  | T |  |  |  |  | . | . | . | . |  |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
656 | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | |
|
|
|
. | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|