Return to main results Retrieve Phyre Job Id

Job DescriptionP21514
Confidence34.68%DateThu Jan 5 11:38:25 GMT 2012
Rank305Aligned Residues140
% Identity12%Templated1xrsb1
SCOP infoFlavodoxin-like Cobalamin (vitamin B12)-binding domain Cobalamin (vitamin B12)-binding domain
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   212.......220.........230.........240.........250........ .260.........270..... ....280.
Predicted Secondary structure 













.......








...



Query SS confidence 














































. . . . . . .
















. . .





Query Sequence  EKECLNLVNKLGNDKIKLVLELTERNPIPVTPEARAIFDSLHQHNIT. . . . . . . FALDDFGTGYATYRYLQ. . . AFPVDF
Query Conservation     
   
         
 


 
             
  
   
  .......
 




        
 ... 
  
 
Alig confidence 

























..


















.......
















...





Template Conservation                   

      
.. 
  
  

   
   
         


  

  

 
  
        
 
Template Sequence  MEETDEYIKENIGRKIVVVGASTGTD. . AHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDFIKKAVELEADV
Template Known Secondary structure  T
S
BTT
..


STT
BTTB

GGG
TT

SSB
TT
S
Template Predicted Secondary structure 







..




















Template SS confidence 















































































   106...110.........120.........130. ........140.........150.........160.........170.........180...
 
   282.......290.........300.........310.........320.........330.........340.........350.........
Predicted Secondary structure 

























Query SS confidence 













































































Query Sequence  IKIDKSFVQMASVDEISGHIVDNIVELARKPGLSIVAEGVETQEQADLMIGKGVHFLQGYLYSPPVPGNKFISEWVMK
Query Conservation 



   
               
   
  


 


 


       
   
    

     
 
           
Alig confidence 






































..













....


















Template Conservation 
 

 


     
      
  


 
    
 




..       
  



....    

  

 

  

  
Template Sequence  LLVSQTVTQKNVHIQNMTHLIELLEAEGLRDRFVLLCGG. . PRINNEIAKELGYD. . . . AGFGPGRFADDVATFAVKT
Template Known Secondary structure 



TTSTT
GGGS
..TT

TTT
S....
TT

Template Predicted Secondary structure 













..







....




Template SS confidence 













































































   184.....190.........200.........210.........220.. .......230...... ...240.........250.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions