Return to main results Retrieve Phyre Job Id

Job DescriptionP21514
Confidence46.93%DateThu Jan 5 11:38:25 GMT 2012
Rank260Aligned Residues106
% Identity8%Templatec3r0jA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:possible two component system response transcriptional PDBTitle: structure of phop from mycobacterium tuberculosis
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   240.........250.........260.........270.........280.........290.........300.........310.........
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  PVTPEARAIFDSLHQHNITFALDDFGTGYATYRYLQAFPVDFIKIDKSFVQMASVDEISGHIVDNIVELARKPGLSIVAE
Query Conservation           
  
   
  
 




        
  
  
 



   
               
   
  


 


 
Alig confidence 




















..






















......






















.



Template Conservation 
       
   
   
  
 .. 
    


  
     





......      
      
        
.
 

Template Sequence  DEANIVELLSVSLKFQGFEVY. . TATNGAQALDRARETRPDAVILD. . . . . . VXPGXDGFGVLRRLRADGIDAPA. LFLT
Template Known Secondary structure  S
TT
..SS

S......


SS
TT



.
Template Predicted Secondary structure 




..




......












.
Template SS confidence 















































































   28.30.........40........ .50.........60.........70. ........80.........90.... ....
 
   320.........330.........340.........350........
Predicted Secondary structure 















Query SS confidence 






































Query Sequence  GVETQEQADLMIGKGVHFLQGYLYSPPVPGNKFISEWVM
Query Conservation 


       
   
    

     
 
          
Alig confidence 


















....















Template Conservation 
         
   

  
....
 

     
   
  
Template Sequence  ARDSLQDKIAGLTLGGDDY. . . . VTKPFSLEEVVARLRV
Template Known Secondary structure 
STTTSTT
....SS

Template Predicted Secondary structure 






....



Template SS confidence 






































   100.........110........ .120.........130....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions