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Job DescriptionP21514
Confidence40.40%DateThu Jan 5 11:38:25 GMT 2012
Rank284Aligned Residues87
% Identity11%Templatec3mglA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:sulfate permease family protein; PDBTitle: crystal structure of permease family protein from vibrio2 cholerae
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   224.....230.........240.........250.........260.........270.........280.........290.........300...
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Query Sequence  NDKIKLVLELTERNPIPVTPEARAIFDSLHQHNITFALDDFGTGYATYRYLQAFPVDFIKIDKSFVQMASVDEISGHIVD
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Template Sequence  LPRELAVYALEGPFFFAAAETFERVXGSIQETP. . . . . . . . . . . . . . . . . . . . . . . QILILRLKWVPFX. . DITGIQTLE
Template Known Secondary structure 

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   438.440.........450.........460.........470 .........480... ......490..
 
   304.....310.........320.........330......
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Query Sequence  NIVELARKPGLSIVAEGVETQEQADLMIGKGVH
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Template Sequence  EXIQSFHKRGIKVLISGA. NSRVSQKLVKAGIV
Template Known Secondary structure  TT


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   493......500.........510 .........520....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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