Return to main results Retrieve Phyre Job Id

Job DescriptionP21514
Confidence95.99%DateThu Jan 5 11:38:25 GMT 2012
Rank25Aligned Residues112
% Identity16%Templatec3khtA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:response regulator; PDBTitle: crystal structure of response regulator from hahella chejuensis
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   240.........250.........260.........270.........280.........290.........300.........310........
Predicted Secondary structure 



























.
Query SS confidence 














































































.
Query Sequence  PVTPEARAIFDSLHQHNITFALDDFGTGYATYRYLQAFPVDFIKIDKSFVQMASVDEISGHIVDNIVELARKPGLSIVA.
Query Conservation           
  
   
  
 




        
  
  
 



   
               
   
  


 


.
Alig confidence 
















































.....
























.
Template Conservation 
           
   
    
  
    


  
     



 
  
.....
   
      

       
 

  
Template Sequence  DNPDDIALIRRVLDRKDIHCQLEFVDNGAKALYQVQQAKYDLIILDIGL. . . . . PIANGFEVXSAVRKPGANQHTPIVIL
Template Known Secondary structure 

TT

SSTT


S
TT
.....GGG
SSSTTTT

Template Predicted Secondary structure 

















.....










Template SS confidence 















































































   22.......30.........40.........50.........60.........70 .........80.........90......
 
   319320.........330.........340....... ..350... ......360
Predicted Secondary structure 














.
.......
Query SS confidence 




























.





. . . . . . .






Query Sequence  EGVETQEQADLMIGKGVHFLQGYLYSPPV. PGNKFI. . . . . . . SEWVMKA
Query Conservation   


       
   
    

     
 .
     .......       
Alig confidence 

















....






.





.......






Template Conservation 
              
  ....  
 

      
   
   
   
   
Template Sequence  TDNVSDDRAKQCXAAGAS. . . . SVVDKSSNNVTDFYGRIYAIFSYWLTVN
Template Known Secondary structure  TT

TT
S....

TTSTS
Template Predicted Secondary structure 







....








Template SS confidence 

















































   97..100.........110.... .....120.........130.........140..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions