Job Description P21514 Confidence 82.28% Date Thu Jan 5 11:38:25 GMT 2012 Rank 108 Aligned Residues 87 % Identity 15% Template c3k8kB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:alpha-amylase, susg; PDBTitle: crystal structure of susg Resolution 2.20 Å

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		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.								240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.
Query Sequence		D	K	I	K	L	V	L	E	L	T	E	R	N	P	I	.	.	.	.	.	.	.	P	V	T	P	E	A	R	A	I	F	D	S	L	H	Q	H	N	I	T	F	A	L	D	D	F	G	T	G	Y	A	T	Y	R	Y	L	Q	A	F	P	V	D	F	I	K	I	D	K	S	F	V	Q	M	A	S	V	D	E	I
Query Conservation																	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.																							.	.																										.	.	.	.	.	.	.	.
Template Conservation																																														.	.																										.	.	.	.	.	.	.	.
Template Sequence		K	R	A	D	I	S	Y	Q	L	L	L	Y	S	F	A	D	S	D	G	D	G	Y	G	D	L	N	G	V	T	Q	K	L	D	Y	L	N	Q	L	G	V	K	A	L	W	.	.	L	S	P	I	H	P	C	X	S	Y	H	G	Y	D	V	T	D	Y	T	K	V	N	P	Q	L	.	.	.	.	.	.	.	.	G
Template Known Secondary structure				S								T	T	T	S			S	S	S	S	S	S								T	T							T	T		S				.	.					S		B	S	S	T	T			S	B	S		T	T	S			T	T	T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																														.	.																										.	.	.	.	.	.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.									.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	H	I	V	D	N	I	V	E	L	A	R	K	P	G	L	S	I	V	A	E	G	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	E	S	D	F	D	R	L	V	T	E	A	H	N	R	G	I	K	I	Y	L	D	Y	V
Template Known Secondary structure																T	T
Template Predicted Secondary structure
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions