Return to main results Retrieve Phyre Job Id

Job DescriptionP21514
Confidence98.44%DateThu Jan 5 11:38:25 GMT 2012
Rank14Aligned Residues87
% Identity14%Templatec3i5aA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:response regulator/ggdef domain protein; PDBTitle: crystal structure of full-length wpsr from pseudomonas syringae
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30........ .40.........50....... ..60.........70......
Predicted Secondary structure 










...





..





Query SS confidence 




































. . .


















. .


















Query Sequence  NSCDFRVFLQEFGTTVHLSLPGSVSEKERLLLKLLMQ. . . GMSVTEISQYRNRSAKTIS. . HQKKQLFEKLGIQSDITFW
Query Conservation     



   

   
                     ...                   ..         
   

 

 
Alig confidence 




































...


















..


















Template Conservation   
   
  



 


       
      
   
               

 




            

  

 

 
Template Sequence  SDLPARYGGEEFAMVLPNTSPGGARLLAEKLRQSVAGMNIPHIAPVPGSSLTVSIGVATVTPQVGQHSRQLILDADKGLY
Template Known Secondary structure  T
TTTT



B


SSTT
B




TT

T
Template Predicted Secondary structure 

























Template SS confidence 















































































   242.......250.........260.........270.........280.........290.........300.........310.........320.
 
   77..80........
Predicted Secondary structure 



Query SS confidence 











Query Sequence  RDIFFQYNPEII
Query Conservation   
          
Alig confidence 











Template Conservation   

  
 


  
Template Sequence  LAKNNGRNQVAA
Template Known Secondary structure  TTTSSS
Template Predicted Secondary structure 




Template SS confidence 











   322.......330...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions