Return to main results Retrieve Phyre Job Id

Job DescriptionP21514
Confidence100.00%DateThu Jan 5 11:38:25 GMT 2012
Rank2Aligned Residues242
% Identity21%Templatec3hvbB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:protein fimx; PDBTitle: crystal structure of the dual-domain ggdef-eal module of2 fimx from pseudomonas aeruginosa
Resolution2.99 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   109110.........120.........130.........140.........150.........160.........170.........180........
Predicted Secondary structure 



















Query SS confidence 















































































Query Sequence  TPEAISLALENHEFKPWIQPVFCAQTGVLTGCEVLVRWEHPQTGIIPPDQFIPLAESSGLIVIMTRQLMKQTADILMPVK
Query Conservation      
  

      
 




 
    
   


 
             
   

   
   
   

  
   
    
Alig confidence 















































































Template Conservation      
  

      
  



   
  
   
 
 
        
    
            

   
      
    
Template Sequence  VIAILQQALETNSFRLLFQPVISLRGDSHENYEVLLRLLNPQGQEVPPAEFLHAAKEAGLAEKIDRWVILNSIKLLAEHR
Template Known Secondary structure  T


SSS

S
TTSS
TST
Template Predicted Secondary structure 


















Template SS confidence 















































































   443......450.........460.........470.........480.........490.........500.........510.........520..
 
   189190.........200.........210.........220.........230.........240.........250.........260........
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  HLLPDNFHIGINVSAGCFLAAGFEKECLNLVNKLGNDKIKLVLELTERNPIPVTPEARAIFDSLHQHNITFALDDFGTGY
Query Conservation          
 



   
        
   
         
 


 
             
  
   
  
 




   
Alig confidence 

.












































































Template Conservation    .     
 



   
        
   
         




 
             
  
   
  






   
Template Sequence  AK. GHQTKLFVHLSSASLQDPGLLPWLGVALKAARLPPESLVFQISEADATSYLKQAKQLTQGLATLHCQAAISQFGCSL
Template Known Secondary structure  TT.T




TTTTTTGGGT

TT
TTT
T
SS
Template Predicted Secondary structure 
.
























Template SS confidence 















































































   523. .....530.........540.........550.........560.........570.........580.........590.........600.
 
   269270.........280.........290.........300.........310.........320.........330.........340........
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  ATYRYLQAFPVDFIKIDKSFVQMASVDEISGHIVDNIVELARKPGLSIVAEGVETQEQADLMIGKGVHFLQGYLYSPPVP
Query Conservation       
  
  
 



   
               
   
  


 


 


       
   
    

     
 
Alig confidence 



























.


















































Template Conservation    
  
  
  
 



           .    
   
         


 


       
   
    

     
  
Template Sequence  NPFNALKHLTVQFIKIDGSFVQDLNQVE. NQEILKGLIAELHEQQKLSIVPFVESASVLATLWQAGATYIQGYYLQGPSQ
Template Known Secondary structure  STTGGGGTS

S
GGGGSSTTS.TT




ST
S

TTT


BS
Template Predicted Secondary structure 











.




















Template SS confidence 















































































   602.......610.........620......... 630.........640.........650.........660.........670.........680
 
   349350..
Predicted Secondary structure 
Query SS confidence 



Query Sequence  GNKF
Query Conservation      
Alig confidence 



Template Conservation    

Template Sequence  AMDY
Template Known Secondary structure  S


Template Predicted Secondary structure 
Template SS confidence 



   681...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions