Job Description P21514 Confidence 75.12% Date Thu Jan 5 11:38:25 GMT 2012
Rank 148 Aligned Residues 106
% Identity 13% Template c3cg0A_
PDB info
PDB header: lyaseChain: A: PDB Molecule: response regulator receiver modulated diguanylate cyclase
PDBTitle: crystal structure of signal receiver domain of modulated diguanylate2 cyclase from desulfovibrio desulfuricans g20, an example of alternate3 folding
Resolution 2.15 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280 . . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
P V T P E A R A I F D S L H Q H N I T F A L D D F G T G Y A T Y R Y L Q A F P V D F I K I D K S F V Q M A S V D E I S G H I V D N I V E L A R K P G L S I V A E
Query Conservation  
                                                                                                             
Alig confidence  
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Template Conservation  
                              .                                       . . . .                                   . .            
Template Sequence  
D G R L A A A T L R I Q L E S L G Y D V .
L G V F D N G E E A V R C A P D L R P D I A L V D .
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I M L C G A L D G V E T A A R L A A .
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G C N L P I I F I T
Template Known Secondary structure  
T . S S S . . . . S S S S S . . S
Template Predicted Secondary structure  
. . . . . . .
Template SS confidence  
   
15 . . . . 20 . . . . . . . . . 30 . . . .
. . . . . 40 . . . . . . . . . 50 . . . . . . . . .
60 . . . . . . . . . 70 . . . . . . .
. . 80 . . . . . . .
 
   
320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350 . . . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
G V E T Q E Q A D L M I G K G V H F L Q G Y L Y S P P V P G N K F I S E W
Query Conservation  
                                                       
Alig confidence  
. . . .
Template Conservation  
                              . . . .                        
Template Sequence  
S S Q D V E T F Q R A K R V N P .
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F G Y L A K P V A A D T L H R S I
Template Known Secondary structure  
T T . . . . S S S
Template Predicted Secondary structure  
. . . .
Template SS confidence  
   
88 . 90 . . . . . . . . . 100 . . .
. . . . . . 110 . . . . . . . . . 120
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]