Return to main results Retrieve Phyre Job Id

Job DescriptionP21514
Confidence40.21%DateThu Jan 5 11:38:25 GMT 2012
Rank285Aligned Residues140
% Identity12%Templatec2p88E_
PDB info PDB header:lyaseChain: E: PDB Molecule:mandelate racemase/muconate lactonizing enzyme PDBTitle: crystal structure of n-succinyl arg/lys racemase from2 bacillus cereus atcc 14579
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   177..180.........190.........200.........210.........220.........230.........240.........250......
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  MKQTADILMPVKHLLPDNFHIGINVSAGCFLAAGFEKECLNLVNKLGNDKIKLVLELTERNPIPVTPEARAIFDSLHQHN
Query Conservation 
  
   
            
 



   
        
   
         
 


 
             
  
   
Alig confidence 

























.




















....



..














...



Template Conservation     
   
  

   
    
 



.        
      
    
....  

..

    
      
 ...    
Template Sequence  VKEDVKRIEAVRERVGNDIAIRVDVN. QGWKNSANTLTALRSLGHLNI. . . . DWIE. . QPVIADDIDAMAHIR. . . SKTD
Template Known Secondary structure  TTTSS
T.TTTBSTSTTTT
....S
..

B
TT
...T

Template Predicted Secondary structure 






.







......






...

Template SS confidence 















































































   168.170.........180.........190... ......200.........210.... .... .220.........230... ....
 
   257..260.........270........ .280.........290.........300.........310.........320 .........330...
Predicted Secondary structure 











.











.



Query SS confidence 





















.









































.












Query Sequence  ITFALDDFGTGYATYRYLQAFP. VDFIKIDKSFVQMASVDEISGHIVDNIVELARKPGLSIVAEG. VETQEQADLMIGK
Query Conservation    
 




        
  
 . 
 



   
               
   
  


 


 
.

       
   
Alig confidence 





















.















.......


















.












Template Conservation 



 

           
     
 
  
    


  .......       
   

           
   
  
 
Template Sequence  LPLMIDEGLKSSREMRQIIKLEAADKVNIKLMKCGGIYP. . . . . . . AVKLAHQAEMAGIECQVGSMVESSVASSAGFHV
Template Known Secondary structure  S
STT

ST

S
TS.......TT


SS

Template Predicted Secondary structure 



















.......








Template SS confidence 














































































   238.240.........250.........260.........270...... ...280.........290.........300.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions