Job Description P21514 Confidence 58.94% Date Thu Jan 5 11:38:25 GMT 2012 Rank 229 Aligned Residues 103 % Identity 19% Template c2dh3A_ PDB info PDB header:transport protein, signaling protein Chain: A: PDB Molecule:4f2 cell-surface antigen heavy chain; PDBTitle: crystal structure of human ed-4f2hc Resolution 2.80 Å

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		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.						.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.
Query SS confidence																								.	.	.	.	.
Query Sequence		P	V	T	P	E	A	R	A	I	F	D	S	L	H	Q	H	N	I	T	F	A	L	.	.	.	.	.	D	D	F	G	T	G	Y	A	T	Y	R	Y	L	Q	A	F	P	V	D	F	I	K	I	D	K	S	F	V	Q	M	A	S	V	D	E	I	S	G	H	I	V	D	N	I	V	E	L	A	R	K	P	G	L
Query Conservation																								.	.	.	.	.
Alig confidence																								.	.	.	.	.									.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Template Sequence		G	N	L	A	G	L	K	G	R	L	D	Y	L	S	S	L	K	V	K	G	L	V	L	G	P	I	H	K	N	Q	K	D	D	V	A	.	.	.	.	.	.	.	.	Q	T	D	L	L	Q	I	D	P	N	F	.	.	.	.	.	.	.	.	G	S	K	E	D	F	D	S	L	L	Q	S	A	K	K	K	S	I
Template Known Secondary structure			S					G	G	G						T	T	T														T	T		S	T	.	.	.	.	.	.	.	.	T								T	T	T	.	.	.	.	.	.	.	.																T	T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.									.	.	.	.	.	.	.	180	.	.	.									.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		315	.	.	.	.	320	.	.	.	.																				.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	I	V	A	E	G	V	E	T	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	A	D	L	M	I	G	K	G	V	H	F	L	Q	G	Y	L	Y	S	P	P	V	P	G	N	K	F	I	S	E	W	V	M
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	V	I	L	D	L	T	P	N	Y	R	G	E	N	S	W	F	S	T	Q	V	D	T	V	A	T	K	V	K	D	A	L	E	F	W	L	Q	A	G	V	D	G	F	Q	V	R	D	I	E	N	L	K	D	A	S	S	F	L	A	E	W	Q	N
Template Known Secondary structure									T	T	T	T	S	S	S	T	T	S	S	S			T																T	T									G	G	G	S	T	T
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions