Return to main results Retrieve Phyre Job Id

Job DescriptionP21514
Confidence54.84%DateThu Jan 5 11:38:25 GMT 2012
Rank239Aligned Residues121
% Identity15%Templatec1kbiB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:cytochrome b2; PDBTitle: crystallographic study of the recombinant flavin-binding domain of2 baker's yeast flavocytochrome b2: comparison with the intact wild-3 type enzyme
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   215....220.........230.........240.........250........ .260.. .......270.........280.........
Predicted Secondary structure 













...
..












Query SS confidence 











































. . .



. .


























Query Sequence  CLNLVNKLGNDKIKLVLELTERNPIPVTPEARAIFDSLHQHNIT. . . FALD. . DFGTGYATYRYLQAFPVDFIKIDKSFV
Query Conservation 
   
         
 


 
             
  
   
  ...
 

..


        
  
  
 



   
Alig confidence 


















...





















...



..


























Template Conservation   


            


...
   
      

 

   
  

 



    
 
  
                   
Template Sequence  PEEIIEAAPSDKQIQWYQL. . . YVNSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTKTNVEESQGAS
Template Known Secondary structure 
S
SS

...


SST



S
SS



TT


S
SS
SGGG
Template Predicted Secondary structure 






...































Template SS confidence 















































































   235....240.........250... ......260.........270.........280.........290.........300.........310.
 
   290.........300.........310.........320.........330........
Predicted Secondary structure 















Query SS confidence 
















































Query Sequence  QMASVDEISGHIVDNIVELARKPGLSIVAEGVETQEQADLMIGKGVHFL
Query Conservation                 
   
  


 


 


       
   
    
Alig confidence 
















































Template Conservation                 
  
      






   


  
   




Template Sequence  RALSKFIDPSLTWKDIEELKKKTKLPIVIKGVQRTEDVIKAAEIGVSGV
Template Known Secondary structure  GG

SSS
TT

T

S

STT
S
Template Predicted Secondary structure 



















Template SS confidence 
















































   320.........330.........340.........350.........360........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions