 |
Job Description | P21514 | Confidence | 79.59% | Date | Thu Jan 5 11:38:25 GMT 2012 |
Rank | 126 | Aligned Residues | 71 |
% Identity | 13% | Template | c1gcyA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:glucan 1,4-alpha-maltotetrahydrolase; |
PDBTitle: high resolution crystal structure of maltotetraose-forming2 exo-amylase
|
Resolution | 1.60 Å |
|
 |
  |   |
242 | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . | . | . | . | . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | P | E | A | R | A | I | F | D | S | L | H | Q | H | N | I | T | F | A | L | . |
. |
. |
. |
. |
D | D | F | G | T | G | Y | A | T | Y | R | Y | L | Q | A | F | P | V | D | F | I | K | I | D | K | S | F | V | Q | M | A | S | V | D | E | I | S | G | H | I | V | D | N | I | V | E | L | A | R | K | P | G | L | S | I |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |
| . | . | . | . | . |
|
|
|
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|
|   |
|
|   |   |
|
|
|   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |
|
| . |   |
|
| . | . | . | . | . | . | . | . |   |   |   |
|
|   |   |
|
|
|   |
|
|   |   |
|
|   |   |
|
|   |
|
Template Sequence |   |
Y | N | I | L | R | Q | Q | A | A | T | I | A | A | D | G | F | S | A | I | W | M | P | V | P | W | R | D | F | S | S | W | S | K | S | G | G | G | E | G | Y | F | W | H | D | F | . |
N | K | N | . |
. |
. |
. |
. |
. |
. |
. |
G | R | Y | G | S | D | A | Q | L | R | Q | A | A | S | A | L | G | G | A | G | V | K | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
|
|
| S |
|
|
|
|
| B |
|
|
| B |
|
| S | S | T | T |
| S | S | S | . |
| S |
| . | . | . | . | . | . | . | . | S | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |  |  |
| . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
36 | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | |
. | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . |
  |
  |   |
317 | . | . | 320 | . |
Predicted Secondary structure |   |
 |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
Query Sequence |   |
V | A | E | G | V |
Query Conservation |   |
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
Template Sequence |   |
L | Y | D | V | V |
Template Known Secondary structure |   |
 |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
  |   |
110 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|