Job Description P0AG80 Confidence 99.97% Date Thu Jan 5 11:28:23 GMT 2012 Rank 54 Aligned Residues 290 % Identity 12% Template d1y4ta_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.80

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	P	F	W	H	S	M	E	G	E	L	G	K	E	V	D	S	L	A	Q	R	F	N	A	E	N	P	D	Y	K	I	V	P	T	Y	K	G	N	Y	E	Q	N	L	S	A	G	I	A	A	F	R	T	G	N	A	P	A	I	L	Q	V	Y	E	V	G	T	A	T	M	M	A	S	K	A	I	K	P	V	Y
Query Conservation
Alig confidence												.	.	.														.												.
Template Conservation												.	.	.														.												.
Template Sequence		E	L	N	I	Y	S	A	R	H	Y	.	.	.	N	A	D	F	E	I	I	K	K	F	E	E	K	.	T	G	I	K	V	N	H	T	Q	A	K	.	A	S	E	L	I	K	R	L	S	L	E	G	S	N	S	P	A	D	I	F	I	T	A	D	I	S	N	L	T	E	A	K	N	L	G	L	L	S	P	V	S
Template Known Secondary structure												.	.	.	T													.												.												G	G	G									S	S										T	T
Template Predicted Secondary structure												.	.	.														.												.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.				.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	F	K	E	A	G	I	Q	F	D	E	S	Q	F	V	P	T	V	S	G	Y	Y	S	D	S	K	T	G	H	L	L	S	Q	P	F	N	S	S	T	P	V	L	Y	Y	N	K	D	A	F	K	K	A	G	L	D	P	E	Q	P	P	K	T	W	Q	D	L	A	D	Y	A	A	K	L	K	A	S	G	M	K
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.									.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.									.	.	.	.	.	.	.
Template Sequence		S	K	Y	L	E	E	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	P	A	H	L	R	D	K	D	K	E	W	F	A	I	T	K	R	A	R	I	I	A	Y	N	K	N	T	N	I	D	I	S	.	.	.	.	.	K	M	K	N	Y	E	D	L	.	.	.	.	.	.	.	A	K	A	E	F	K
Template Known Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		G	G	G	B		T	T	S	S															T	T	S					T	.	.	.	.	.	T			S	G	G	G	G	.	.	.	.	.	.	.	G		G	G	G	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.									.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.															.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120						.	.	.	.	.	.	.	.								.	130	.	.	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	G	Y	A	S	G	W	Q	G	W	I	Q	L	E	N	F	S	A	W	N	G	L	P	F	A	S	K	N	N	G	F	D	G	T	D	A	V	L	E	F	N	K	P	E	Q	V	K	H	I	A	M	L	E	E	M	N	K	K	G	D	F	S	Y	V	G	R	K	D	E	S	T	E	K	F	Y	N	G	D	C	A
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	E	I	V	M	R	S	A	T	A	P	Y	S	K	T	L	L	A	S	I	I	A	N	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	K	E	A	K	A	W	A	K	G	V	L	E	N	L	A	T	N	P	K	G	G	D	R	D	Q	A	R	Q	V	F	A	G	E	A	K
Template Known Secondary structure		T							T	T	S																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															B	S	S	S			S	S											T	S		S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.																				160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		M	T	T	A	S	S	G	S	L	A	N	I	R	E	.	Y	A	K	F	N	Y	G	V	G	M	M	P	Y	D	A	D	A	K	D	A	P	Q	N	A	I	I	G	G	A	S	L	W	V	M	Q	G	K	D	K	E	T	Y	T	G	V	A	K	F	L	D	F	L	A	K	P	E	N	A	A	E	W	H	Q	K	T
Query Conservation																.
Alig confidence																.																																					.	.
Template Conservation																																																					.	.
Template Sequence		F	A	V	M	N	T	Y	Y	I	G	L	L	K	N	S	K	N	P	K	D	V	E	V	G	N	S	L	G	I	I	F	P	N	Q	D	N	R	G	T	H	I	N	I	S	G	I	A	M	T	K	S	.	.	S	K	N	Q	D	A	A	K	K	F	M	E	F	M	L	S	P	E	I	Q	K	I	L	T	D	S	N
Template Known Secondary structure															T		S	S									T						T	T	T	T	T	T		B											T	T	.	.		S													T	S
Template Predicted Secondary structure																																																					.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.			.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	L	P	I	T	K	A	A	Y	D	L	T	R	E	Q	G	F	Y	E	K	N	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	E	F	P	I	R	N	D	V	E	L	S	Q	T	V	K	D	F	G	T	F	K	E
Template Known Secondary structure						S	S	T	T	S														B
Template Predicted Secondary structure
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions