Job Description P0AG80 Confidence 98.12% Date Thu Jan 5 11:28:23 GMT 2012 Rank 79 Aligned Residues 297 % Identity 15% Template d1pc3a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.16

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	G	N	A	Q	A	V	T	T	I	P	F	W	H	S	M	E	G	E	L	G	K	E	V	D	S	L	A	Q	R	F	N	A	E	N	P	D	Y	K	I	V	P	T	Y	K	G	N	Y	E	Q	N	L	S	A	G	I	A	A	F	R	T	G	N	A	P	A	I	L	Q	V	Y	E	V	G	T	A	T	M	M
Query Conservation
Alig confidence															.	.																																		.	.	.	.	.													.
Template Conservation															.	.																																		.	.	.	.	.													.
Template Sequence		A	T	T	P	A	S	S	P	V	T	L	A	E	.	.	T	G	S	T	L	L	Y	P	L	F	N	L	W	G	P	A	F	H	E	R	Y	P	N	V	T	I	T	A	Q	G	T	G	S	.	.	.	.	.	G	A	G	I	A	Q	A	A	A	G	T	V	.	N	I	G	A	S	D	A	Y	L	S	E	G	D	M
Template Known Secondary structure				S			S	S							.	.				T	T	T															S	T	T							B				.	.	.	.	.									T	T	S		.	S					S	S
Template Predicted Secondary structure															.	.																																		.	.	.	.	.													.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.						.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.								.	.	.	.	.
Predicted Secondary structure																																																																.						.	.	.	.	.	.	.
Query SS confidence																																																																.						.	.	.	.	.	.	.
Query Sequence		A	S	K	A	I	K	P	V	Y	D	V	F	K	E	A	G	I	Q	F	D	E	S	Q	F	V	P	T	V	S	G	Y	Y	S	D	S	K	T	G	H	L	L	S	Q	P	F	N	S	S	T	P	V	L	Y	Y	N	K	D	A	F	K	K	A	.	G	L	D	P	E	.	.	.	.	.	.	.	Q	P	P	K	T
Query Conservation																																																																.						.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.						.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	A	H	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	M	N	I	A	L	A	I	S	A	Q	Q	V	N	Y	N	L	P	G	V	S	E	H	L	K	L	N	G	K	V	L	A	A	M	Y	Q	G	T	I	K	T
Template Known Secondary structure				S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T																		T	T			S															T	S			B
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		92	.	.	.																																			.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.						.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.
Query Sequence		W	Q	D	L	A	D	Y	A	A	K	L	K	A	S	G	M	K	C	G	Y	A	S	G	W	Q	G	W	I	Q	L	E	N	F	S	A	W	N	G	L	P	F	A	S	K	N	N	G	F	D	G	T	D	A	V	L	E	F	N	K	P	E	Q	V	.	.	.	.	.	K	H	I	A	M	L	E	E	M	N	K	K
Query Conservation																																																																	.	.	.	.	.
Alig confidence																																																																	.	.	.	.	.
Template Conservation
Template Sequence		W	D	D	P	Q	I	A	A	L	N	P	G	V	N	L	P	G	T	A	V	V	P	L	H	R	S	D	G	S	G	D	T	F	L	F	T	Q	Y	L	S	K	Q	D	P	E	G	W	G	K	S	P	G	F	G	T	T	V	D	F	P	A	V	P	G	A	L	G	E	N	G	N	G	G	M	V	T	G	C	A	E
Template Known Secondary structure		T	T								S	T	T							B							S	S																	T	T	T	T	T	T	T	T			S	S	S							T	T
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.											.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.
Query Sequence		G	D	F	S	Y	V	G	R	K	D	E	S	T	E	K	F	Y	N	G	D	C	A	M	.	.	.	.	.	.	.	.	.	.	T	T	A	S	S	G	S	L	A	N	I	R	E	Y	A	K	F	N	Y	G	V	G	M	M	P	Y	D	A	D	A	K	D	A	P	Q	N	A	I	I	G	G	A	S	L	W	V	M
Query Conservation																									.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	P	G	C	V	A	Y	I	G	I	S	F	L	D	Q	A	S	Q	R	G	L	G	E	A	Q	L	G	N	S	S	G	N	F	L	L	P	D	A	Q	S	I	Q	A	A	A	A	G	F	A	S	K	T	P	A	N	Q	A	I	S	M	I	D	G	P	A	P	D	G	Y	P	I	I	N	Y	E	Y	A	I	V	N
Template Known Secondary structure		S	T	T							G	G	G							T	T									T	T	S						S									T	T	T	T	T				T	T						T	T		S		T	T			S
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		314	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		Q	G	K	.	D	K	E	T	Y	T	G	V	A	K	F	L	D	F	L	A	K	P	E	N	A	A	E	W	H	Q	K	T	G	Y	L	P	I	T	K	A	A	Y	D
Query Conservation					.
Alig confidence					.
Template Conservation
Template Sequence		N	R	Q	K	D	A	A	T	A	Q	T	L	Q	A	F	L	H	W	A	I	T	D	G	N	K	A	S	F	L	D	Q	V	H	F	Q	P	L	P	P	A	V	V	K
Template Known Secondary structure		S	B		S	S															T	T	G	G	G	S								T		B
Template Predicted Secondary structure
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions