Job Description P0AG80 Confidence 100.00% Date Thu Jan 5 11:28:23 GMT 2012 Rank 1 Aligned Residues 394 % Identity 19% Template d1eu8a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.90

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																											.	.
Query SS confidence																																											.	.
Query Sequence		A	V	T	T	I	P	F	W	H	S	M	E	G	E	L	G	K	E	V	D	S	L	A	Q	R	F	N	A	E	N	P	D	Y	K	I	V	P	T	Y	K	G	.	.	N	Y	E	Q	N	L	S	A	G	I	A	A	F	R	T	G	N	A	P	A	I	L	Q	V	Y	E	V	G	T	A	T	M	M	A	S	K	A
Query Conservation																																											.	.
Alig confidence																																											.	.
Template Conservation
Template Sequence		E	E	G	K	I	V	F	A	V	G	G	A	P	N	E	I	E	Y	W	K	G	V	I	A	E	F	E	K	K	Y	P	G	V	T	V	E	L	K	R	Q	A	T	D	T	E	Q	R	R	L	D	L	V	N	A	L	R	G	K	S	S	D	P	D	V	F	L	M	D	V	A	W	L	G	Q	F	I	A	S	G	W
Template Known Secondary structure			S	S									S																		S	T	T										S	S													T	T	T		S	S								T	T	T								T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	P	V	Y	D	V	F	K	E	A	G	I	Q	F	D	E	S	Q	F	V	P	T	V	S	G	Y	Y	S	D	S	K	T	G	H	L	L	S	Q	P	F	N	S	S	T	P	V	L	Y	Y	N	K	D	A	F	K	K	A	G	L	D	P	E	Q	P	P	K	T	W	Q	D	L	A	D	Y	A	A	K	L	K
Query Conservation
Alig confidence																			.	.	.																																												.	.
Template Conservation																			.	.	.																																												.	.
Template Sequence		L	E	P	L	D	D	Y	V	Q	K	D	N	Y	D	L	S	V	.	.	.	F	F	Q	S	V	I	N	L	A	D	K	Q	G	G	K	L	Y	A	L	P	V	Y	I	D	A	G	L	L	Y	Y	R	K	D	L	L	E	K	Y	G	Y	S	K	P	.	.	P	E	T	W	Q	E	L	V	E	M	A	Q	K	I	Q
Template Known Secondary structure		B			S								T			G	G	G	.	.	.	B									T			T	T																								T	T			S		.	.		S	B
Template Predicted Secondary structure																			.	.	.																																												.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.				100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.			.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		181	.	.	.	.	.						.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.						.	250
Predicted Secondary structure								.	.	.	.	.																																																															.	.	.	.	.
Query SS confidence								.	.	.	.	.																																																															.	.	.	.	.
Query Sequence		A	S	G	M	K	C	.	.	.	.	.	G	Y	A	S	G	W	Q	G	W	I	Q	L	E	N	F	S	A	W	N	G	L	P	F	A	S	K	N	N	G	F	D	G	T	D	A	V	L	E	F	N	K	P	E	Q	V	K	H	I	A	M	L	E	E	M	N	K	K	G	D	F	S	Y	.	.	.	.	.	V	G
Query Conservation								.	.	.	.	.																																																															.	.	.	.	.
Alig confidence								.	.	.	.	.																																																															.	.	.	.	.
Template Conservation
Template Sequence		S	G	E	R	E	T	N	P	N	F	W	G	F	V	W	Q	G	K	Q	Y	E	G	L	V	C	D	F	V	E	Y	V	Y	S	N	G	G	S	L	G	E	F	K	D	G	K	W	V	P	T	L	N	K	P	E	N	V	E	A	L	Q	F	M	V	D	L	I	H	K	Y	K	I	S	P	P	N	T	Y	T	E	M
Template Known Secondary structure					T	T	T		T	T									S	S	S													T	T	T			S					T	T						T	T																	T	S			S		G	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	D	E	S	T	E	K	F	Y	N	G	D	C	A	M	T	T	A	S	S	G	S	L	A	N	I	R	E	Y	A	K	F	N	Y	G	V	G	M	M	P	Y	D	A	D	A	K	D	A	P	Q	N	A	I	I	G	G	A	S	L	W	V	M	Q	G	K	D	K	E	T	Y	T	G	V	A	K	F	L	D	F
Query Conservation
Alig confidence																																																																			.	.
Template Conservation																																																																			.	.
Template Sequence		T	E	E	P	V	R	L	M	F	Q	Q	G	N	A	A	F	E	R	N	W	P	Y	A	W	G	L	H	N	A	D	D	S	P	V	K	G	K	V	G	V	A	P	L	P	H	F	P	G	H	K	S	A	A	T	L	G	G	W	H	I	G	I	S	K	Y	.	.	S	D	N	K	A	L	A	W	E	F	V	K	F
Template Known Secondary structure												T	T									T							T	S	T	T		T	T	T	T									B		T	T	S					B									B	T	T	.	.		S
Template Predicted Secondary structure																																																																			.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.			.	.	.	.	.	.	.	310	.	.	.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	K	P	E	N	A	A	E	W	H	Q	K	T	G	Y	L	P	I	T	K	A	A	Y	D	L	T	R	E	Q	G	F	Y	E	K	N	P	G	A	D	T	A	T	R	Q	M	L	N	K	P	P	L	P	F	T	K	G	L	R	L	G	N	M	P	Q	I	R	V	I	V	D	E	E	L	E	S	V	W	T	G
Query Conservation
Alig confidence																																.	.	.																								.	.	.	.	.
Template Conservation																																.	.	.																								.	.	.	.	.
Template Sequence		V	E	S	Y	S	V	Q	K	G	F	A	M	N	L	G	W	N	P	G	R	V	D	V	Y	D	D	P	A	V	V	.	.	.	S	K	S	P	H	L	K	E	L	R	A	V	F	E	N	A	V	P	R	P	I	V	P	.	.	.	.	.	Y	Y	P	Q	L	S	E	I	I	Q	K	Y	V	N	S	A	L	A	G
Template Known Secondary structure			T	S											T				B	S	B	T	T	G	G	G	S					.	.	.				T					T						T		B						T	.	.	.	.	.	T																		T
Template Predicted Secondary structure																																.	.	.																								.	.	.	.	.
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.				.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.						.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	T	P	Q	Q	A	L	D	T	A	V	E	R	G	N	Q	L	L	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	I	S	P	Q	E	A	L	D	K	A	Q	K	E	A	E	E	L	V	K	Q
Template Known Secondary structure		S	S																		T
Template Predicted Secondary structure
Template SS confidence
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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