Job Description P0AG80 Confidence 90.56% Date Thu Jan 5 11:28:23 GMT 2012 Rank 84 Aligned Residues 78 % Identity 9% Template c3k2dA_ PDB info PDB header:immune system Chain: A: PDB Molecule:abc-type metal ion transport system, periplasmic component; PDBTitle: crystal structure of immunogenic lipoprotein a from vibrio vulnificus Resolution 2.60 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	Q	A	V	T	T	I	P	F	W	H	S	M	E	G	E	L	G	K	E	V	D	S	L	A	Q	R	F	N	A	E	N	P	D	Y	K	I	V	P	T	Y	K	G	N	Y	E	Q	N	L	S	A	G	I	A	A	F	R	T	G	N	A	P	A	I	L	Q	V	Y	E	V	G	T	A	T	M	M	A	S	K
Query Conservation
Alig confidence												.																							.													.	.	.	.													.
Template Conservation												.																							.													.	.	.	.													.
Template Sequence		G	H	M	D	T	S	K	V	K	V	.	G	V	M	A	G	A	E	A	Q	V	A	E	V	A	A	K	V	A	K	E	K	Y	.	G	L	D	V	E	L	V	T	F	T	D	Y	.	.	.	.	V	T	P	N	A	A	L	D	D	G	S	I	.	D	M	N	A	F	Q	H	K	P	Y	L	D	R	Q	V	E	D
Template Known Secondary structure				S								.				T	T																		.										S		T	.	.	.	.	T	S								T	S		.	S
Template Predicted Secondary structure												.																							.													.	.	.	.													.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.					70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	K	P	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	D	Y	K	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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