Job Description P0AG80 Confidence 91.28% Date Thu Jan 5 11:28:23 GMT 2012 Rank 83 Aligned Residues 123 % Identity 14% Template c3gxaA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:outer membrane lipoprotein gna1946; PDBTitle: crystal structure of gna1946 Resolution 2.25 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	P	F	W	H	S	M	E	G	E	L	G	K	E	V	D	S	L	A	Q	R	F	N	A	E	N	P	D	Y	K	I	V	P	T	Y	K	G	N	Y	E	Q	N	L	S	A	G	I	A	A	F	R	T	G	N	A	P	A	I	L	Q	V	Y	E	V	G	T	A	T	M	M	A	S	K	A	I	K	P	V	Y
Query Conservation
Alig confidence												.																	.													.	.	.	.													.																							.
Template Conservation												.																	.													.	.	.	.													.																							.
Template Sequence		E	I	V	F	G	T	T	V	G	D	.	F	G	D	M	V	K	E	Q	I	Q	P	E	L	E	K	K	.	G	Y	T	V	K	L	V	E	F	T	D	Y	.	.	.	.	V	R	P	N	L	A	L	A	E	G	E	L	.	D	I	N	V	F	Q	H	K	P	Y	L	D	D	F	K	K	E	H	N	L	D	I	.
Template Known Secondary structure									T	T		.								T							T	T	.	T									S	S	S	.	.	.	.	S									T	S		.	S																		T				.
Template Predicted Secondary structure												.																	.													.	.	.	.													.																							.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.					.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	F	K	E	A	G	I	Q	F	D	E	S	Q	F	V	P	T	V	S	G	Y	Y	S	D	S	K	T	G	H	L	L	S	Q	P	F	N	S	S	T	P	V	L	Y	Y	N	K	D	A	F	K	K	A	G	L
Query Conservation
Alig confidence		.	.																																													.	.
Template Conservation		.	.																																													.	.
Template Sequence		.	.	T	E	V	F	Q	V	P	T	A	P	L	G	L	Y	P	G	K	L	K	S	L	E	E	V	K	D	G	S	T	V	S	A	P	N	D	P	S	N	F	A	R	V	L	V	.	.	M	L	D	E	L	G	W
Template Known Secondary structure		.	.								B								S	S				G	G	G			T	T								S										.	.					T	T	S
Template Predicted Secondary structure		.	.																																													.	.
Template SS confidence
				116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.			160	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions