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Job DescriptionP0AG80
Confidence100.00%DateThu Jan 5 11:28:23 GMT 2012
Rank21Aligned Residues364
% Identity18%Templatec3d4cA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:maltose-binding periplasmic protein, linker, zona pellucida PDBTitle: zp-n domain of mammalian sperm receptor zp3 (crystal form i)
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40.........50.........60.........70.........80.........90.........100.....
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Query Sequence  TIPFWHSMEGELGKEVDSLAQRFNAENPDYKIVPTYKGNYEQNLSAGIAAFRTGNAPAILQVYEVGTATMMASKAIKPVY
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Template Sequence  KLVIWI. NGDKGYNGLAEVGKKFEKD. TGIKVTVE. . . HPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEIT
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Query Sequence  DVFKEAGIQFDESQFVPTVSGYYSDSKTGHLLSQPFNSSTPVLYYNKDAFKKAGLDPEQPPKTWQDLADYAAKLKASGMK
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Template Sequence  P. . . . . . . . DKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLL. . . . . . . PNPPKTWEEIPALDKELKAKGKS
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SSSB


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SBTTTTT
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Query Sequence  CGYASGWQGWIQLENFSAWNGLPFASKNNGFDGTDAVLEFNKPEQVKHIAMLEEMNKKGDFSYVGRKDESTEKFYNGDCA
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Template Sequence  ALMFNLQEPYFTWPLIAADGGYAFKYENGKY. . DIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETA
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   147..150.........160.........170....... ..180.........190.........200.........210.........220....
 
   266...270.........280.........290.........300.........310.........320......... 330.........340....
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Query Sequence  MTTASSGSLANIREYAKFNYGVGMMPYDADAKDAPQNAIIGGASLWVMQGKDKETYTGVAKFLD. FLAKPENAAEWHQKT
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Template Sequence  MTINGPWAWSNIDTS. KVNYGVTVLPTFKGQPSKPFV. . . . . GVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDK
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GGGT.T




BBTTB



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   225....230......... 240.........250.........260 .........270.........280.........290........
 
   345....350.........360.........370.........380.........390.........400.........410.........420....
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Query Sequence  GYLPITKAAYDLTREQGFYEKNPGADTATRQMLNKPPLPFTKGLRLGNMPQIRVIVDEELESVWTGKKTPQQALDTAVER
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Template Sequence  PLGAVALKSYE. . . . . EELAKDPRIAATMENAQKGEIMP. . . . . NIPQMSAFWYAVRTAVINAASGRQTVDAALAAAQTN
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   299300......... 310.........320.........330.. .......340.........350.........360........
 
   425..
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Query Sequence  GNQ
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Template Sequence  AAA
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   369370.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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