Job Description P0AG80 Confidence 100.00% Date Thu Jan 5 11:28:23 GMT 2012 Rank 34 Aligned Residues 370 % Identity 17% Template c2xd3A_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:maltose/maltodextrin-binding protein; PDBTitle: the crystal structure of malx from streptococcus pneumoniae2 in complex with maltopentaose. Resolution 2.00 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	P	F	W	H	S	M	E	G	E	L	G	K	E	V	D	S	L	A	Q	R	F	N	A	E	N	P	D	Y	K	I	V	P	T	Y	K	G	N	Y	E	Q	N	L	S	A	G	I	A	A	F	R	T	G	N	A	P	A	I	L	Q	V	Y	E	V	G	T	A	T	M	M	A	S	K	A	I	K	P	V	Y
Query Conservation
Alig confidence								.	.																		.													.
Template Conservation								.	.																		.													.
Template Sequence		E	L	T	V	Y	V	.	.	D	E	G	Y	K	S	Y	I	E	E	V	A	K	A	Y	E	K	.	E	A	G	V	K	V	T	L	K	T	G	D	.	A	L	G	G	L	D	K	L	S	L	D	N	Q	N	G	N	V	P	D	V	M	M	A	P	Y	D	R	V	G	S	L	G	S	D	G	Q	L	S	E	V	K
Template Known Secondary structure								.	.		G	G	G														.		S	S										.							T								S				S															T	T		B
Template Predicted Secondary structure								.	.																		.													.
Template SS confidence
		42	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	F	K	E	A	G	I	Q	F	D	E	S	Q	F	V	P	T	V	S	G	Y	Y	S	D	S	K	T	G	H	L	L	S	Q	P	F	N	S	S	T	P	V	L	Y	Y	N	K	D	A	F	K	K	A	G	L	D	P	E	Q	P	P	K	T	W	Q	D	L	A	D	Y	A	A	K	L	K	A	S	G	M	K
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.
Template Sequence		L	S	D	.	.	.	.	.	.	.	.	.	G	A	K	T	D	D	T	T	K	S	L	V	T	A	A	N	G	K	V	Y	G	A	P	A	V	I	E	S	L	V	M	Y	Y	N	K	D	L	V	K	D	A	P	.	.	.	.	.	.	.	K	T	F	A	D	L	E	N	L	A	K	D	S	K	Y	A	F	A	G
Template Known Secondary structure				G	.	.	.	.	.	.	.	.	.	G	G											B		T	T			B																T	T	T		S	S			.	.	.	.	.	.	.		B										S	G	G	G	B		T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.
Template SS confidence
		118	.	120										.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.								.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220			.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.				.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure																																					.	.																													.	.	.
Query SS confidence																																					.	.																													.	.	.
Query Sequence		C	G	Y	A	S	G	W	Q	G	W	I	Q	L	E	N	F	S	A	W	N	G	L	P	F	A	S	K	N	N	G	F	D	G	T	D	.	.	A	V	L	E	F	N	K	P	E	Q	V	K	H	I	A	M	L	E	E	M	N	K	K	G	D	F	S	Y	.	.	.	V	G	R	K	D	E	S	T	E	K	F	Y
Query Conservation																																					.	.																													.	.	.
Alig confidence																																					.	.																													.	.	.
Template Conservation
Template Sequence		E	D	G	K	T	T	A	F	L	A	D	W	T	N	F	Y	Y	T	Y	G	L	L	A	G	N	G	A	Y	V	F	G	Q	N	G	K	D	A	K	D	I	G	L	A	N	D	G	S	I	V	G	I	N	Y	A	K	S	W	Y	E	K	W	P	K	G	M	Q	D	T	E	G	A	G	N	L	I	Q	T	Q	F	Q
Template Known Secondary structure		S	T	T		B		S					T	T	S											T	T									T							T	T	S															T	T	S		G	G	G	G		S	S
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	D	C	A	M	T	T	A	S	S	G	S	L	A	N	I	R	E	Y	A	K	F	N	Y	G	V	G	M	M	P	Y	D	A	D	A	K	D	A	P	Q	N	A	I	I	G	G	A	S	L	W	V	M	Q	G	K	D	K	E	T	Y	T	G	V	A	K	F	L	D	F	L	A	K	P	E	N	A	A	E	W
Query Conservation
Alig confidence																						.	.	.																																	.	.
Template Conservation																						.	.	.																																	.	.
Template Sequence		E	G	K	T	A	A	I	I	D	G	P	W	K	A	Q	A	F	K	D	A	.	.	.	K	V	N	Y	G	V	A	T	I	P	T	L	P	N	G	K	E	Y	A	A	F	G	G	G	K	A	W	V	I	P	Q	A	.	.	V	K	N	L	E	A	S	Q	K	F	V	D	F	L	V	A	T	E	Q	Q	K	V	L
Template Known Secondary structure		T	T			S						G	G	G							T	.	.	.	T										B		T	T	S															B	T	T	.	.		S														S
Template Predicted Secondary structure																						.	.	.																																	.	.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.				.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.			.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Q	K	T	G	Y	L	P	I	T	K	A	A	Y	D	L	T	R	E	Q	G	F	Y	E	K	N	P	G	A	D	T	A	T	R	Q	M	L	N	K	P	P	L	P	F	T	K	G	L	R	L	G	N	M	P	Q	I	R	V	I	V	D	E	E	L	E	S	V	W	T	G	K	K	T	P	Q	Q	A	L	D	T
Query Conservation
Alig confidence																						.	.	.	.																				.	.	.	.	.
Template Conservation																						.	.	.	.																				.	.	.	.	.
Template Sequence		Y	D	K	T	N	E	I	P	A	N	T	E	A	R	S	Y	A	E	G	K	.	.	.	.	N	D	E	L	T	T	A	V	I	K	Q	F	K	N	T	Q	P	L	P	.	.	.	.	.	N	I	S	Q	M	S	A	V	W	D	P	A	K	N	M	L	F	D	A	V	S	G	Q	K	D	A	K	T	A	A	N	D
Template Known Secondary structure										S	S											.	.	.	.														S						.	.	.	.	.		S	G	G	G	G	G	T													T	T	S	S
Template Predicted Secondary structure																						.	.	.	.																				.	.	.	.	.
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.					.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.						.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
		421	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	E	R	G	N	Q	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	T	L	I	K	E	T	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		408	.	410	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions