Job Description P0AG80 Confidence 100.00% Date Thu Jan 5 11:28:23 GMT 2012 Rank 24 Aligned Residues 374 % Identity 16% Template c2gh9A_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:maltose/maltodextrin-binding protein; PDBTitle: thermus thermophilus maltotriose binding protein bound with2 maltotriose Resolution 1.95 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		T	I	P	F	W	H	S	M	E	G	E	L	G	K	E	V	D	S	L	A	Q	R	F	N	A	E	N	P	D	Y	K	I	V	P	T	Y	K	G	N	Y	E	Q	N	L	S	A	G	I	A	A	F	R	T	G	N	A	P	A	I	L	.	Q	V	Y	E	V	G	T	A	T	M	M	A	S	K	A	I	K	P	V
Query Conservation																																																														.
Alig confidence																											.													.																						.
Template Conservation																											.													.
Template Sequence		K	I	T	V	W	T	H	F	G	G	P	E	L	E	W	L	K	E	Q	A	R	T	F	E	R	.	T	S	G	T	K	V	E	V	V	E	V	P	.	F	A	E	I	K	Q	K	F	I	L	G	A	P	Q	G	Q	A	A	D	L	V	V	T	V	P	H	D	W	V	G	E	M	A	Q	A	G	V	L	E	P	V
Template Known Secondary structure																											.	T	T	S										.												G	G	G	T		S		S							G	G	G							T	T		B
Template Predicted Secondary structure																											.													.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	V	F	K	E	A	G	I	Q	F	D	E	S	Q	F	V	P	T	V	S	G	Y	Y	S	D	S	K	T	G	H	L	L	S	Q	P	F	N	S	S	T	P	V	L	Y	Y	N	K	D	A	F	K	K	A	G	L	D	P	E	Q	P	P	K	T	W	Q	D	L	A	D	Y	A	A	K	L	K	A	S	G	M
Query Conservation
Alig confidence									.	.	.	.	.	.																																								.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.																																								.	.	.	.	.	.	.
Template Sequence		G	K	Y	V	T	Q	A	.	.	.	.	.	.	Y	L	A	D	L	Q	G	V	A	V	E	A	F	T	F	G	G	R	L	M	G	L	P	A	F	A	E	S	V	A	L	I	Y	N	K	K	Y	V	K	.	.	.	.	.	.	.	E	P	P	R	T	W	E	E	F	L	A	L	A	Q	K	L	T	T	G	A	T
Template Known Secondary structure		G	G	G	S				.	.	.	.	.	.					B								T			T	T				S														T	T	T		S	.	.	.	.	.	.	.	S			S	S													S	S	S
Template Predicted Secondary structure									.	.	.	.	.	.																																								.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.							.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.								.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.		.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		K	C	G	Y	A	S	G	W	Q	G	W	I	Q	L	E	N	F	S	A	W	N	G	L	P	F	A	S	K	N	N	G	F	D	G	T	D	A	V	L	E	F	N	K	P	E	Q	V	K	H	I	A	M	L	E	E	M	N	K	K	G	D	F	S	Y	.	V	G	R	K	D	E	S	T	E	K	F	Y	N	G	D
Query Conservation																																																																		.
Alig confidence																																																																		.
Template Conservation
Template Sequence		F	G	F	L	Y	N	I	G	D	P	Y	F	N	F	G	F	F	K	A	F	G	A	E	N	V	F	A	K	D	A	K	G	N	L	D	P	T	K	L	L	I	G	G	E	V	G	E	K	A	L	Q	F	I	K	D	L	R	F	K	Y	N	L	V	P	E	G	V	D	Y	G	V	A	D	G	A	F	K	D	G	A
Template Known Secondary structure								T	T													T		S	S	S					T	T	T								S	S	S																	T	S			S		T	T													T
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	A	M	T	T	A	S	S	G	S	L	A	N	I	R	E	Y	A	K	F	N	Y	G	V	G	M	M	P	Y	D	A	D	A	K	D	A	P	Q	N	A	I	I	G	G	A	S	L	W	V	M	Q	G	K	D	K	E	T	Y	T	G	V	A	K	F	L	D	F	L	A	K	P	E	N	A	A	E	W	H	Q	K
Query Conservation
Alig confidence																						.	.	.	.
Template Conservation																						.	.	.	.
Template Sequence		L	A	M	I	L	N	G	P	W	A	L	G	D	Y	K	K	A	K	V	D	.	.	.	.	F	G	I	A	P	F	P	V	P	P	G	A	K	N	P	W	G	P	F	L	G	V	Q	G	V	V	V	N	A	Y	S	K	N	K	T	Q	A	V	N	F	A	K	T	L	V	T	G	R	N	L	V	A	F	N	Q	A
Template Known Secondary structure									G	G	G							T	T			.	.	.	.										T	T		S	S														B	T	T		T	T												T	S
Template Predicted Secondary structure																						.	.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.					.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.		.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		T	G	Y	L	P	I	T	K	A	A	Y	D	L	T	R	E	Q	G	F	Y	E	K	N	P	G	A	D	T	A	T	R	Q	M	L	N	K	P	P	L	P	F	T	K	G	L	R	L	G	N	M	P	Q	I	R	V	I	V	D	E	E	L	E	S	V	W	.	T	G	K	K	T	P	Q	Q	A	L	D	T	A	V
Query Conservation																																																																			.
Alig confidence															.	.	.	.	.	.																								.	.	.	.	.																			.
Template Conservation															.	.	.	.	.	.																								.	.	.	.	.
Template Sequence		G	G	R	I	P	V	S	K	S	A	V	K	Q	.	.	.	.	.	.	L	E	K	D	P	V	V	A	G	F	S	K	V	F	P	L	G	A	P	M	P	N	I	.	.	.	.	.	P	E	M	G	K	V	W	G	P	W	G	N	A	I	S	L	A	I	Q	R	P	D	S	N	V	K	K	I	V	E	D	M	V
Template Known Secondary structure		S						B							.	.	.	.	.	.	T	T	T	S								T	T	G	G	G							S	.	.	.	.	.	T	T																			T	T
Template Predicted Secondary structure															.	.	.	.	.	.																								.	.	.	.	.
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.							.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.						.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
		423	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	G	N	Q	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	I	K	K	A	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		372	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions